Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77592 | Soybean | cytosol | 63.64 | 61.67 |
| KRH27882 | Soybean | cytosol | 65.45 | 61.54 |
| Solyc08g081680.1.1 | Tomato | nucleus | 59.55 | 56.71 |
| KRH41249 | Soybean | cytosol | 57.73 | 56.7 |
| PGSC0003DMT400031740 | Potato | plastid | 60.45 | 56.6 |
| KRH59981 | Soybean | cytosol, mitochondrion | 55.45 | 53.28 |
| AT5G41590.1 | Thale cress | cytosol | 50.45 | 50.23 |
| Bra025486.1-P | Field mustard | cytosol | 50.91 | 50.22 |
| Bra025487.1-P | Field mustard | cytosol | 50.91 | 50.22 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 45.45 | 50.0 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 45.45 | 46.3 |
| VIT_09s0002g06920.t01 | Wine grape | cytosol | 35.0 | 37.2 |
| VIT_02s0025g03730.t01 | Wine grape | cytosol | 29.09 | 31.68 |
| VIT_02s0025g03740.t01 | Wine grape | plastid | 28.64 | 30.58 |
| VIT_02s0025g03750.t01 | Wine grape | cytosol | 27.27 | 28.57 |
| VIT_08s0056g00130.t01 | Wine grape | cytosol | 30.45 | 28.15 |
Protein Annotations
| EntrezGene:100253460 | wikigene:100253460 | Gene3D:3.20.90.20 | MapMan:35.1 | ProteinID:CBI34400 | ProteinID:CBI34400.3 |
| UniProt:D7TV75 | EMBL:FN596251 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR025659 |
| InterPro:IPR038595 | EntrezGene:LOC100253460 | wikigene:LOC100253460 | InterPro:LOR | InterPro:LOR_sf | PFAM:PF04525 |
| PANTHER:PTHR31087 | PANTHER:PTHR31087:SF14 | SUPFAM:SSF54518 | TMHMM:TMhelix | InterPro:Tubby-like_C | UniParc:UPI00015CD149 |
| ArrayExpress:VIT_02s0025g00500 | EnsemblPlantsGene:VIT_02s0025g00500 | EnsemblPlants:VIT_02s0025g00500.t01 | unigene:Vvi.20517 | RefSeq:XP_002272759 | RefSeq:XP_002272759.1 |
Description
No Description!
Coordinates
chr2:-:596206..597759
Molecular Weight (calculated)
24738.7 Da
IEP (calculated)
9.139
GRAVY (calculated)
-0.199
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFLKSRSVT VHEDHQPEEE YIAAAASTTT GGDCRSLTVW RKSLLFSCTG FTVIDSYGDL VYRVDNYIGQ RPGEVTLMDA SGKSVLTVRR RKNLRLVENW
101: HVYEGEVGDT SRTKRPSSSK QPICSVKKHI NILHANHNVL AYVFLGNSDK RYAYRIEGSY ANRSCKVLDK SRRVVAEIKR KEAMNEGVSF GVEVFLLIVC
201: PGFDSGFAMA LVLLLDQMFS
101: HVYEGEVGDT SRTKRPSSSK QPICSVKKHI NILHANHNVL AYVFLGNSDK RYAYRIEGSY ANRSCKVLDK SRRVVAEIKR KEAMNEGVSF GVEVFLLIVC
201: PGFDSGFAMA LVLLLDQMFS
001: MFPFLKQRSR SVHGEDAPSS TESTVSVAAA DIGGACTTLT VWRKSLLVSC EGFTVIDSNG DLIYRVDNYA RTRPEELILM DKDGNSLLLM HRTKKITLVD
101: SWGIYEANDT KGETKIPKCP TWYMRKNLKM NILSTKSDIL AYVYSGSFDK KNSYIIKGSY RCKSCKIVHV PLNKTVVEIK RKEVRTKGVR FGSDVFDLVV
201: NPGFDTGLAM ALVLLLDQMF S
101: SWGIYEANDT KGETKIPKCP TWYMRKNLKM NILSTKSDIL AYVYSGSFDK KNSYIIKGSY RCKSCKIVHV PLNKTVVEIK RKEVRTKGVR FGSDVFDLVV
201: NPGFDTGLAM ALVLLLDQMF S
Arabidopsis Description
Protein LURP-one-related 17 [Source:UniProtKB/Swiss-Prot;Acc:A0MFL4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.