Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025487.1-P | Field mustard | cytosol | 84.16 | 83.41 |
| Bra025486.1-P | Field mustard | cytosol | 84.16 | 83.41 |
| VIT_02s0025g00500.t01 | Wine grape | cytosol | 50.23 | 50.45 |
| KRH41249 | Soybean | cytosol | 48.87 | 48.21 |
| KRH59981 | Soybean | cytosol, mitochondrion | 48.42 | 46.72 |
| KRH77592 | Soybean | cytosol | 46.61 | 45.37 |
| KRH27882 | Soybean | cytosol | 47.06 | 44.44 |
| PGSC0003DMT400031740 | Potato | plastid | 45.7 | 42.98 |
| Solyc08g081680.1.1 | Tomato | nucleus | 44.34 | 42.42 |
| AT2G38640.1 | Thale cress | cytosol | 35.75 | 40.31 |
| AT1G80120.1 | Thale cress | cytosol | 31.22 | 32.86 |
| AT3G15810.1 | Thale cress | cytosol | 30.32 | 30.45 |
| AT1G53870.3 | Thale cress | cytosol, nucleus, peroxisome | 22.17 | 22.58 |
| AT1G53875.1 | Thale cress | cytosol, mitochondrion, nucleus, peroxisome | 23.08 | 22.37 |
| AT1G63410.2 | Thale cress | cytosol | 21.27 | 21.86 |
| AT3G14260.1 | Thale cress | cytosol | 22.62 | 21.74 |
| AT1G53890.3 | Thale cress | cytosol | 19.46 | 17.7 |
Protein Annotations
| Gene3D:3.20.90.20 | MapMan:35.1 | EntrezGene:834161 | UniProt:A0A178U814 | UniProt:A0MFL4 | ProteinID:AED94695.1 |
| ArrayExpress:AT5G41590 | EnsemblPlantsGene:AT5G41590 | RefSeq:AT5G41590 | TAIR:AT5G41590 | RefSeq:AT5G41590-TAIR-G | EnsemblPlants:AT5G41590.1 |
| TAIR:AT5G41590.1 | ProteinID:BAB11465.1 | EMBL:DQ447028 | EMBL:DQ653340 | GO:GO:0005575 | InterPro:IPR025659 |
| InterPro:IPR038595 | InterPro:LOR | InterPro:LOR_sf | RefSeq:NP_198974.1 | ProteinID:OAO89775.1 | PFAM:PF04525 |
| PO:PO:0000293 | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF14 | SUPFAM:SSF54518 | InterPro:Tubby-like_C | UniParc:UPI00000A79C8 |
| SEG:seg | : | : | : | : | : |
Description
Protein LURP-one-related 17 [Source:UniProtKB/Swiss-Prot;Acc:A0MFL4]
Coordinates
chr5:-:16632086..16634012
Molecular Weight (calculated)
24795.1 Da
IEP (calculated)
9.499
GRAVY (calculated)
-0.167
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPFLKQRSR SVHGEDAPSS TESTVSVAAA DIGGACTTLT VWRKSLLVSC EGFTVIDSNG DLIYRVDNYA RTRPEELILM DKDGNSLLLM HRTKKITLVD
101: SWGIYEANDT KGETKIPKCP TWYMRKNLKM NILSTKSDIL AYVYSGSFDK KNSYIIKGSY RCKSCKIVHV PLNKTVVEIK RKEVRTKGVR FGSDVFDLVV
201: NPGFDTGLAM ALVLLLDQMF S
101: SWGIYEANDT KGETKIPKCP TWYMRKNLKM NILSTKSDIL AYVYSGSFDK KNSYIIKGSY RCKSCKIVHV PLNKTVVEIK RKEVRTKGVR FGSDVFDLVV
201: NPGFDTGLAM ALVLLLDQMF S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.