Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027804.1-P | Field mustard | cytosol | 80.47 | 90.58 |
| CDY49893 | Canola | cytosol | 80.47 | 90.58 |
| CDY45367 | Canola | cytosol | 64.65 | 90.26 |
| Solyc12g056310.1.1 | Tomato | plastid | 40.93 | 44.67 |
| PGSC0003DMT400010898 | Potato | cytosol | 26.05 | 44.09 |
| VIT_02s0025g03730.t01 | Wine grape | cytosol | 41.4 | 44.06 |
| KRH27952 | Soybean | cytosol | 39.07 | 43.52 |
| VIT_02s0025g03740.t01 | Wine grape | plastid | 41.4 | 43.2 |
| PGSC0003DMT400007876 | Potato | plastid | 40.0 | 42.79 |
| VIT_02s0025g03750.t01 | Wine grape | cytosol | 41.4 | 42.38 |
| PGSC0003DMT400014913 | Potato | plastid | 40.93 | 42.31 |
| KRH77515 | Soybean | cytosol | 38.14 | 42.27 |
| PGSC0003DMT400012847 | Potato | cytosol | 25.58 | 41.67 |
| Solyc08g080750.2.1 | Tomato | plastid | 39.07 | 41.58 |
| KRH59852 | Soybean | cytosol | 37.67 | 41.33 |
| Solyc08g007980.2.1 | Tomato | plastid | 39.53 | 40.87 |
| Solyc08g080760.1.1 | Tomato | mitochondrion | 37.67 | 40.7 |
| PGSC0003DMT400032165 | Potato | cytosol | 32.09 | 39.88 |
| Solyc08g080770.2.1 | Tomato | plastid | 37.67 | 38.21 |
| PGSC0003DMT400032166 | Potato | plastid | 37.21 | 37.74 |
| TraesCS2A01G113800.1 | Wheat | plastid | 35.81 | 36.84 |
| HORVU2Hr1G019720.1 | Barley | plastid | 35.35 | 36.36 |
| EER99890 | Sorghum | plastid | 33.95 | 35.96 |
| TraesCS2D01G114400.1 | Wheat | plastid | 35.81 | 35.65 |
| TraesCS2B01G132800.1 | Wheat | plastid | 34.88 | 35.05 |
| KRH41152 | Soybean | cytosol | 24.19 | 34.9 |
| Os07t0672600-00 | Rice | plastid | 35.81 | 33.62 |
| AT1G53870.3 | Thale cress | cytosol, nucleus, peroxisome | 33.02 | 32.72 |
| AT3G14260.1 | Thale cress | cytosol | 34.88 | 32.61 |
| AT1G53875.1 | Thale cress | cytosol, mitochondrion, nucleus, peroxisome | 32.56 | 30.7 |
| Zm00001d029119_P001 | Maize | mitochondrion | 32.09 | 27.94 |
| TraesCS4A01G142700.1 | Wheat | mitochondrion, plastid | 30.7 | 27.16 |
| KXG39402 | Sorghum | mitochondrion | 32.56 | 27.13 |
| TraesCS4B01G155500.1 | Wheat | cytosol, mitochondrion | 30.7 | 26.4 |
| HORVU6Hr1G081400.1 | Barley | mitochondrion | 30.7 | 26.09 |
| TraesCS4D01G168500.1 | Wheat | mitochondrion | 30.7 | 25.58 |
| AT2G38640.1 | Thale cress | cytosol | 22.33 | 24.49 |
| AT1G80120.1 | Thale cress | cytosol | 23.72 | 24.29 |
| AT1G53890.3 | Thale cress | cytosol | 27.44 | 24.28 |
| AT3G15810.1 | Thale cress | cytosol | 24.65 | 24.09 |
| AT5G41590.1 | Thale cress | cytosol | 21.86 | 21.27 |
| GSMUA_Achr3P24000_001 | Banana | nucleus | 39.53 | 10.29 |
Protein Annotations
| Gene3D:3.20.90.20 | MapMan:35.1 | EntrezGene:842647 | ProteinID:AAF19698.1 | ProteinID:ANM59607.1 | ArrayExpress:AT1G63410 |
| EnsemblPlantsGene:AT1G63410 | RefSeq:AT1G63410 | TAIR:AT1G63410 | RefSeq:AT1G63410-TAIR-G | EnsemblPlants:AT1G63410.2 | Unigene:At.52344 |
| InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR | InterPro:LOR_sf | RefSeq:NP_001321952.1 | PFAM:PF04525 |
| PANTHER:PTHR31087 | PANTHER:PTHR31087:SF25 | UniProt:Q9SH27 | SUPFAM:SSF54518 | InterPro:Tubby-like_C | UniParc:UPI000009E299 |
Description
Protein LURP-one-related 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH27]
Coordinates
chr1:-:23510075..23511997
Molecular Weight (calculated)
24753.6 Da
IEP (calculated)
5.005
GRAVY (calculated)
-0.225
Length
215 amino acids
Sequence
(BLAST)
(BLAST)
001: MARVFPQAAI SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKCSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYRECG SFTSTEEVKP
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGI DGEVKQLRDF
201: EEEEVAVGDE IAIEI
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGI DGEVKQLRDF
201: EEEEVAVGDE IAIEI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.