CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029119_P001	Maize	mitochondrion	86.82	90.69
EER99890	Sorghum	plastid	41.86	53.2
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	48.84	51.85
HORVU6Hr1G081400.1	Barley	mitochondrion	50.0	50.99
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	48.84	50.4
TraesCS4D01G168500.1	Wheat	mitochondrion	50.0	50.0
KRH27952	Soybean	cytosol	32.17	43.01
KRH77515	Soybean	cytosol	32.17	42.78
VIT_02s0025g03740.t01	Wine grape	plastid	33.33	41.75
PGSC0003DMT400032165	Potato	cytosol	27.91	41.62
VIT_02s0025g03730.t01	Wine grape	cytosol	32.56	41.58
VIT_02s0025g03750.t01	Wine grape	cytosol	33.72	41.43
PGSC0003DMT400007876	Potato	plastid	32.17	41.29
Solyc08g080750.2.1	Tomato	plastid	31.4	40.1
KRH59852	Soybean	cytosol	30.23	39.8
Solyc08g080760.1.1	Tomato	mitochondrion	30.62	39.7
Solyc08g080770.2.1	Tomato	plastid	32.17	39.15
KRH47711	Soybean	peroxisome	29.84	39.09
KRH06275	Soybean	peroxisome	29.84	38.31
PGSC0003DMT400032166	Potato	plastid	31.4	38.21
Bra001544.1-P	Field mustard	cytosol	30.62	37.98
Bra021544.1-P	Field mustard	cytosol	30.23	37.5
PGSC0003DMT400012847	Potato	cytosol	18.99	37.12
Solyc12g056310.1.1	Tomato	plastid	27.91	36.55
EES04157	Sorghum	plastid	28.29	36.32
Bra027804.1-P	Field mustard	cytosol	26.74	36.13
CDY49893	Canola	cytosol	26.74	36.13
PGSC0003DMT400010898	Potato	cytosol	17.44	35.43
CDY33238	Canola	cytosol, peroxisome, plastid	31.4	35.22
CDX82489	Canola	cytosol	31.4	35.22
PGSC0003DMT400014913	Potato	plastid	28.29	35.1
KRH41152	Soybean	cytosol	20.16	34.9
CDY45367	Canola	cytosol	20.54	34.42
AT3G14260.1	Thale cress	cytosol	30.62	34.35
CDY67855	Canola	peroxisome	30.62	34.35
Solyc08g007980.2.1	Tomato	plastid	27.52	34.13
EES02017	Sorghum	cytosol, mitochondrion, plastid	29.07	34.09
CDX75761	Canola	cytosol	30.23	33.91
CDY24068	Canola	peroxisome	26.36	33.83
Bra039696.1-P	Field mustard	cytosol	26.36	33.83
Bra039698.1-P	Field mustard	cytosol	26.36	33.83
CDY24067	Canola	cytosol	26.36	33.83
Bra039697.1-P	Field mustard	cytosol, extracellular, peroxisome	25.97	33.33
AT1G53870.3	Thale cress	cytosol, nucleus, peroxisome	27.91	33.18
EES04156	Sorghum	plastid	27.52	33.02
CDY71164	Canola	cytosol, extracellular, peroxisome	24.42	32.81
AT1G63410.2	Thale cress	cytosol	27.13	32.56
EES04155	Sorghum	cytosol	27.13	32.11
AT1G53875.1	Thale cress	cytosol, mitochondrion, nucleus, peroxisome	27.52	31.14
CDY24069	Canola	cytosol	20.54	30.29
EES01655	Sorghum	cytosol	23.64	29.19
CDY36612	Canola	cytosol	15.12	28.68
CDY36610	Canola	cytosol	16.28	28.38
EES15617	Sorghum	cytosol	24.42	27.39
EES09153	Sorghum	cytosol	24.42	27.04
EES19708	Sorghum	plastid	23.26	26.79
EES16590	Sorghum	cytosol	23.26	26.67
AT1G53890.3	Thale cress	cytosol	23.26	24.69
EES16588	Sorghum	cytosol, nucleus, plastid	21.71	23.33
EES09152	Sorghum	plastid	22.09	22.8
EES18481	Sorghum	cytosol	19.38	20.75
EES03690	Sorghum	cytosol	17.83	20.63
EES09156	Sorghum	plastid	20.16	20.47
EES09154	Sorghum	plastid	21.71	19.58
EES15616	Sorghum	plastid	22.87	18.91
GSMUA_Achr3P24000_001	Banana	nucleus	34.5	10.77

Protein Annotations

EnsemblPlants:KXG39402	EnsemblPlantsGene:SORBI_3001G375200	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF25	PFAM:PF04525	ProteinID:KXG39402
ProteinID:KXG39402.1	SEG:seg	SUPFAM:SSF54518	UniParc:UPI00081AC628	UniProt:A0A1B6QN97	MapMan:35.1

Description

hypothetical protein

Coordinates

chr1:-:66374556..66375896

Molecular Weight (calculated)

27848.6 Da

IEP (calculated)

9.554

GRAVY (calculated)

-0.203

Length

258 amino acids

Sequence
(BLAST)

001: MCTSSLKLWR AMVRVHSASS QGLGLGAAGP VAPPPDHHQP AAAAAAAVRP RPRRVHGQPE VFTIWMKSLV LNGSGCTVYD SAGSIVYRVD NYGARRAADV
101: CLMDVAGNVV LQILKKKKLG FGRKWEGYRW AGDQEQEQEQ EQEQERRRPW LKVARAWAWR GPSCCTCDCE LGLGGSESTT TTTTTVRYRM DDGRIAPARG
201: ARIVDGATGL AVAEVKRKTT AEGVALGADV LTLAVEPGVD RSVIMGLVLV HGLINRAM

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.