Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 3
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d042237_P001 | Maize | mitochondrion | 79.55 | 78.12 |
| Zm00001d011924_P001 | Maize | plastid | 79.55 | 73.84 |
| TraesCS3D01G442700.1 | Wheat | cytosol | 55.0 | 50.0 |
| EES04157 | Sorghum | plastid | 45.0 | 49.25 |
| EES04156 | Sorghum | plastid | 44.09 | 45.12 |
| EES04155 | Sorghum | cytosol | 44.09 | 44.5 |
| Os01t0931700-00 | Rice | plastid | 29.09 | 39.02 |
| EER99890 | Sorghum | plastid | 35.0 | 37.93 |
| KXG39402 | Sorghum | mitochondrion | 34.09 | 29.07 |
| EES09156 | Sorghum | plastid | 29.55 | 25.59 |
| EES01655 | Sorghum | cytosol | 23.64 | 24.88 |
| EES15617 | Sorghum | cytosol | 25.91 | 24.78 |
| EES03690 | Sorghum | cytosol | 24.09 | 23.77 |
| EES16590 | Sorghum | cytosol | 24.09 | 23.56 |
| EES19708 | Sorghum | plastid | 23.18 | 22.77 |
| EES09154 | Sorghum | plastid | 29.55 | 22.73 |
| EES09153 | Sorghum | cytosol | 23.18 | 21.89 |
| EES16588 | Sorghum | cytosol, nucleus, plastid | 23.64 | 21.67 |
| EES09152 | Sorghum | plastid | 24.09 | 21.2 |
| EES18481 | Sorghum | cytosol | 22.27 | 20.33 |
| EES15616 | Sorghum | plastid | 27.27 | 19.23 |
Protein Annotations
| EnsemblPlants:EES02017 | EnsemblPlantsGene:SORBI_3003G415000 | EntrezGene:8059409 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 |
| InterPro:LOR | InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF12 | PFAM:PF04525 |
| ProteinID:EES02017 | ProteinID:EES02017.1 | RefSeq:XP_002456897.1 | SEG:seg | SUPFAM:SSF54518 | UniParc:UPI0001A84AC6 |
| UniProt:C5XH27 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:72148693..72149901
Molecular Weight (calculated)
23686.3 Da
IEP (calculated)
8.688
GRAVY (calculated)
-0.245
Length
220 amino acids
Sequence
(BLAST)
(BLAST)
001: MAITRIQPLS AHLHPRAATP SDDDPAAGKQ QVYTVWMKSL VLSGHGCTVY GEDGRVAYRV DNYGCSRSHE AYVMDGDGRT LLKLLKKNFA AFETWKGYSY
101: GTTGTAGMEQ EESSKRWFSV QKARGILKKK GGPLDSGRAV ATVCVGGEVY RIDGVPRKSE YRISGPDGEV VAETKRKQTE SGVVLGDDVL SLTVGPSADA
201: ADRLLLVGLV VVCGLLSRCI
101: GTTGTAGMEQ EESSKRWFSV QKARGILKKK GGPLDSGRAV ATVCVGGEVY RIDGVPRKSE YRISGPDGEV VAETKRKQTE SGVVLGDDVL SLTVGPSADA
201: ADRLLLVGLV VVCGLLSRCI
001: MQIYSNNRTM RTKFSLNLIS PAKNMVKIHP DKAFPVDFSV GEGKTSPYLT TEKESFTIWM RSLVFHSKGC TVFDSKGNLI YRVDNYNSKS CSEVYLMDLY
101: GKILFTLRQK KLGLFKSWKG YNSTGTRFQL RKNFKILPKG SSSSYKVVMG SRIVDGDHQS CYKIVKRKSV FTIEDGSGRL LAEVKKKQSN IKSLDLGKDV
201: LTMMVEPQVD HSLIMGIVIA YSLLKCKL
101: GKILFTLRQK KLGLFKSWKG YNSTGTRFQL RKNFKILPKG SSSSYKVVMG SRIVDGDHQS CYKIVKRKSV FTIEDGSGRL LAEVKKKQSN IKSLDLGKDV
201: LTMMVEPQVD HSLIMGIVIA YSLLKCKL
Arabidopsis Description
LURP-one-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AWJ7]
SUBAcon: [mitochondrion,peroxisome,nucleus,cytosol]
SUBAcon: [mitochondrion,peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.