CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043087_P001	Maize	cytosol, extracellular, plastid	87.56	86.32
Zm00001d012520_P001	Maize	cytosol	75.6	76.7
Os01t0817650-00	Rice	cytosol, extracellular, plastid	77.99	76.53
HORVU4Hr1G047270.1	Barley	cytosol, extracellular, peroxisome	72.25	74.02
TraesCS3D01G334200.1	Wheat	cytosol	70.33	72.41
TraesCS3A01G340800.1	Wheat	cytosol, extracellular, peroxisome	70.81	71.84
TraesCS3B01G372300.1	Wheat	cytosol, peroxisome, plastid	69.38	71.43
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	70.81	71.15
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	69.38	70.39
TraesCS3A01G340700.1	Wheat	cytosol, extracellular, peroxisome	67.94	70.3
TraesCS3B01G372400.1	Wheat	plastid	68.9	69.9
TraesCS3B01G372600.1	Wheat	cytosol, extracellular, peroxisome	68.42	69.76
HORVU3Hr1G080430.1	Barley	plastid	72.25	64.53
EES19708	Sorghum	plastid	64.59	60.27
TraesCS3A01G340900.1	Wheat	mitochondrion	69.86	52.71
GSMUA_Achr11P...	Banana	cytosol	49.76	52.53
HORVU3Hr1G080440.1	Barley	plastid	71.29	52.1
GSMUA_Achr7P21880_001	Banana	cytosol	50.24	51.98
GSMUA_Achr4P02410_001	Banana	cytosol, peroxisome, plastid	51.2	51.44
GSMUA_Achr10P...	Banana	plastid	49.76	49.76
EES16590	Sorghum	cytosol	51.67	48.0
VIT_08s0032g00760.t01	Wine grape	cytosol	45.93	48.0
EES09153	Sorghum	cytosol	53.11	47.64
VIT_08s0056g00180.t01	Wine grape	cytosol	48.33	46.76
EES16588	Sorghum	cytosol, nucleus, plastid	53.59	46.67
EES15617	Sorghum	cytosol	50.72	46.09
GSMUA_Achr11P...	Banana	cytosol	49.76	44.26
CDX91482	Canola	cytosol	37.8	40.51
CDY62436	Canola	cytosol	37.8	40.31
Bra005092.1-P	Field mustard	cytosol	37.32	40.0
CDY62435	Canola	cytosol	37.32	40.0
CDY07714	Canola	cytosol	37.32	40.0
CDY07715	Canola	cytosol	37.32	39.8
AT2G38640.1	Thale cress	cytosol	37.32	39.8
Bra000079.1-P	Field mustard	cytosol	37.32	39.8
EES09152	Sorghum	plastid	47.37	39.6
Bra000080.1-P	Field mustard	cytosol	36.84	39.49
CDY60759	Canola	cytosol	36.84	39.49
Bra017111.1-P	Field mustard	cytosol	36.84	39.29
CDX93313	Canola	cytosol	36.84	39.29
CDY18377	Canola	cytosol	36.84	39.29
KRH09578	Soybean	cytosol	38.76	38.94
EES04157	Sorghum	plastid	29.19	30.35
EES04156	Sorghum	plastid	29.67	28.84
EES03690	Sorghum	cytosol	30.14	28.25
EES04155	Sorghum	cytosol	28.23	27.06
EER99890	Sorghum	plastid	25.36	26.11
EES09156	Sorghum	plastid	31.1	25.59
EES18481	Sorghum	cytosol	28.23	24.48
EES15616	Sorghum	plastid	35.89	24.04
KXG39402	Sorghum	mitochondrion	29.19	23.64
EES02017	Sorghum	cytosol, mitochondrion, plastid	24.88	23.64
EES09154	Sorghum	plastid	32.06	23.43

Protein Annotations

EnsemblPlants:EES01655	EnsemblPlantsGene:SORBI_3003G335900	EntrezGene:8055296	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF21	PFAM:PF04525
ProteinID:EES01655	ProteinID:EES01655.1	RefSeq:XP_002456535.1	SEG:seg	SUPFAM:SSF54518	UniParc:UPI0001A8458B
UniProt:C5XN84	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:65915654..65917614

Molecular Weight (calculated)

22507.7 Da

IEP (calculated)

8.455

GRAVY (calculated)

-0.142

Length

209 amino acids

Sequence
(BLAST)

001: MAKVHPNVLP SPAERAAAGA AAAGGVEEEE ATSLTVWRKS LLFNCRGYTV FDARGDLAFR VDSYDDEAEV VLMDPDGRPA FTVRRKRLSL SGEHWLIYAG
101: EETRRPVYAV KRGGGGKSMA RVTPCAGARA GAGASSYEVE GSYARRRCVV YDAERRAVAE VQPKEAVVGT DVFRLVVQPG VDVSLAMAVV VALDQLFGRP
201: SLLRSWSSS

Best Arabidopsis Sequence Match ( AT2G38640.1 )
(BLAST)

001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS

Arabidopsis Description

Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.