Factsheet for Zm00001d043087_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
extracellular 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01655	Sorghum	cytosol	86.32	87.56
Zm00001d012520_P001	Maize	cytosol	72.64	74.76
Os01t0817650-00	Rice	cytosol, extracellular, plastid	73.11	72.77
HORVU4Hr1G047270.1	Barley	cytosol, extracellular, peroxisome	66.51	69.12
TraesCS3D01G334200.1	Wheat	cytosol	66.04	68.97
TraesCS3B01G372300.1	Wheat	cytosol, peroxisome, plastid	65.09	67.98
TraesCS3A01G340800.1	Wheat	cytosol, extracellular, peroxisome	66.04	67.96
TraesCS3A01G340700.1	Wheat	cytosol, extracellular, peroxisome	64.15	67.33
TraesCS3B01G372600.1	Wheat	cytosol, extracellular, peroxisome	65.09	67.32
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	66.04	67.31
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	64.62	66.5
TraesCS3B01G372400.1	Wheat	plastid	64.15	66.02
Zm00001d010627_P001	Maize	cytosol, plastid	66.04	61.95
Zm00001d038514_P001	Maize	plastid	65.09	61.06
HORVU3Hr1G080430.1	Barley	plastid	66.51	60.26
GSMUA_Achr11P...	Banana	cytosol	48.11	51.52
GSMUA_Achr7P21880_001	Banana	cytosol	48.11	50.49
Zm00001d052371_P001	Maize	cytosol	52.36	50.45
GSMUA_Achr4P02410_001	Banana	cytosol, peroxisome, plastid	49.06	50.0
TraesCS3A01G340900.1	Wheat	mitochondrion	65.09	49.82
GSMUA_Achr10P...	Banana	plastid	48.11	48.8
HORVU3Hr1G080440.1	Barley	plastid	65.57	48.6
Zm00001d044671_P001	Maize	cytosol	49.06	47.71
VIT_08s0032g00760.t01	Wine grape	cytosol	44.81	47.5
VIT_08s0056g00180.t01	Wine grape	cytosol	45.75	44.91
GSMUA_Achr11P...	Banana	cytosol	47.64	42.98
Zm00001d044474_P001	Maize	cytosol	48.58	42.92
KRH09578	Soybean	cytosol	38.21	38.94
CDX91482	Canola	cytosol	35.38	38.46
CDY62436	Canola	cytosol	35.38	38.27
CDY62435	Canola	cytosol	34.91	37.95
CDY07714	Canola	cytosol	34.91	37.95
Bra005092.1-P	Field mustard	cytosol	34.91	37.95
Bra000079.1-P	Field mustard	cytosol	34.91	37.76
AT2G38640.1	Thale cress	cytosol	34.91	37.76
CDY07715	Canola	cytosol	34.91	37.76
CDY60759	Canola	cytosol	34.43	37.44
Bra000080.1-P	Field mustard	cytosol	34.43	37.44
CDY18377	Canola	cytosol	34.43	37.24
CDX93313	Canola	cytosol	34.43	37.24
Bra017111.1-P	Field mustard	cytosol	34.43	37.24
Zm00001d052372_P002	Maize	plastid	48.58	32.7
Zm00001d011925_P001	Maize	cytosol	29.25	30.39
Zm00001d011926_P001	Maize	cytosol	28.77	30.2
Zm00001d043318_P001	Maize	cytosol	29.72	28.25
Zm00001d042239_P001	Maize	plastid	28.77	27.85
Zm00001d023305_P001	Maize	plastid	33.49	26.79
Zm00001d044670_P001	Maize	nucleus	34.43	26.16
Zm00001d052373_P001	Maize	plastid	32.08	25.86
Zm00001d005038_P001	Maize	plastid	30.66	25.49
Zm00001d000310_P001	Maize	cytosol	27.36	23.77
Zm00001d029119_P001	Maize	mitochondrion	26.89	23.08
Zm00001d042237_P001	Maize	mitochondrion	23.11	21.88
Zm00001d011924_P001	Maize	plastid	22.64	20.25

Protein Annotations

EMBL:EU955603	EnsemblPlants:Zm00001d043087_P001	EnsemblPlants:Zm00001d043087_T001	EnsemblPlantsGene:Zm00001d043087	EntrezGene:100281104	Gene3D:3.20.90.20
InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087
PANTHER:PTHR31087:SF21	PFAM:PF04525	ProteinID:ONM36894.1	SEG:seg	SUPFAM:SSF54518	UniParc:UPI000182AEA9
UniProt:B6SS88	MapMan:35.1	:	:	:	:

Description

GTP binding protein

Coordinates

chr3:-:188863997..188864635

Molecular Weight (calculated)

22510.8 Da

IEP (calculated)

9.104

GRAVY (calculated)

-0.064

Length

212 amino acids

Sequence
(BLAST)

001: MAKVHPNVLL SSSSPAEGAA AAAAGGEGEE TSLTVWRKSL LFNCRGYTVF DARGDLAYRA DSYDAEAEVV LMDPAGRPAF TVRRRRLSLS GEQWLIYAGE
101: ETRRPAYAVK RGGGGGKSVA RVTPCAAVPA AAGAAALPAY EVEGSYARRR CVVYDAHQRR AVAEVQPKEA VGSDVFRLVV QPGVDVSLAM AVVVALDQLF
201: GRPSLLRSWS SP

Best Arabidopsis Sequence Match ( AT1G80120.1 )
(BLAST)

001: MKGGLLVDDE FIHGEERSLT VRKTSLFFAG DGFTVYDCKG SLVFRVDSYG GPNTRDTDEV VLMDAHGRCL LTLRRKRPSL RRRWEGYLGE RSDGQKPIFG
101: VRRSSIIGRN SVTVEVYGDY QCSEYLIEGS FGARNCTVVE AETRRKVAEI RRKVDASTNV MLGKDVFSLN VKPGFDGAFA MGLVLVLDQI YGDDLLEVGE
201: EQVHPSAEDL

Arabidopsis Description

Protein LURP-one-related 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.