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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:extracellular
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G80120.1 Zm00001d005003_P002 AT2G41090.1 17360592
AT1G80120.1 Zm00001d008278_P001 AT2G41090.1 17360592
AT1G80120.1 Zm00001d010649_P001 AT2G41090.1 17360592
AT1G80120.1 Zm00001d028948_P001 AT2G41090.1 17360592
AT1G80120.1 Zm00001d038543_P004 AT2G41090.1 17360592
AT1G80120.1 Zm00001d038545_P001 AT2G41090.1 17360592
AT1G80120.1 Zm00001d041430_P001 AT2G41090.1 17360592
AT1G80120.1 Zm00001d043144_P001 AT2G41090.1 17360592
AT1G80120.1 Zm00001d047597_P001 AT2G41090.1 17360592
AT1G80120.1 Zm00001d052415_P001 AT2G41090.1 17360592
AT1G80120.1 Zm00001d005003_P002 AT5G21274.1 17360592
AT1G80120.1 Zm00001d008278_P001 AT5G21274.1 17360592
AT1G80120.1 Zm00001d010649_P001 AT5G21274.1 17360592
AT1G80120.1 Zm00001d028948_P001 AT5G21274.1 17360592
AT1G80120.1 Zm00001d038543_P004 AT5G21274.1 17360592
AT1G80120.1 Zm00001d038545_P001 AT5G21274.1 17360592
AT1G80120.1 Zm00001d041430_P001 AT5G21274.1 17360592
AT1G80120.1 Zm00001d043144_P001 AT5G21274.1 17360592
AT1G80120.1 Zm00001d047597_P001 AT5G21274.1 17360592
AT1G80120.1 Zm00001d052415_P001 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES18481 Sorghum cytosol 91.8 92.95
Os05t0510100-01 Rice cytosol 80.33 82.7
HORVU1Hr1G077760.1 Barley cytosol 73.77 78.26
TraesCS1B01G341900.1 Wheat cytosol 74.59 77.45
TraesCS1D01G330600.1 Wheat cytosol 74.59 77.12
TraesCS1A01G328100.1 Wheat cytosol 75.0 75.31
Zm00001d043318_P001 Maize cytosol 58.61 64.13
GSMUA_Achr3P13680_001 Banana cytosol 28.28 52.67
PGSC0003DMT400001705 Potato cytosol 40.98 47.39
VIT_09s0002g06920.t01 Wine grape cytosol 40.16 47.34
Solyc03g116710.2.1 Tomato cytosol 40.16 46.45
AT1G80120.1 Thale cress cytosol 39.34 45.71
CDY37567 Canola cytosol 38.93 45.24
CDY41119 Canola cytosol 38.93 45.24
Bra008497.1-P Field mustard cytosol 38.93 45.24
KRH09722 Soybean cytosol 39.75 44.29
KRH44464 Soybean cytosol 39.75 44.29
CDY58464 Canola cytosol 38.52 44.13
Bra001606.1-P Field mustard cytosol 38.11 43.66
KRH47444 Soybean cytosol 38.93 43.38
CDY30113 Canola cytosol 38.93 43.38
CDX75845 Canola cytosol 37.7 43.19
Bra027206.1-P Field mustard cytosol 38.11 42.47
AT3G15810.1 Thale cress cytosol 38.11 42.27
KRH23583 Soybean cytosol 38.11 42.27
CDX87294 Canola cytosol 38.52 36.58
Bra035195.1-P Field mustard cytosol 31.15 36.19
Zm00001d044671_P001 Maize cytosol 27.87 31.19
Zm00001d052371_P001 Maize cytosol 26.64 29.55
Zm00001d012520_P001 Maize cytosol 24.59 29.13
Zm00001d010627_P001 Maize cytosol, plastid 25.41 27.43
Zm00001d043087_P001 Maize cytosol, extracellular, plastid 23.77 27.36
Zm00001d044474_P001 Maize cytosol 26.23 26.67
Zm00001d038514_P001 Maize plastid 24.59 26.55
Zm00001d005038_P001 Maize plastid 27.05 25.88
Zm00001d023305_P001 Maize plastid 27.05 24.91
Zm00001d052373_P001 Maize plastid 26.23 24.33
Zm00001d044670_P001 Maize nucleus 26.23 22.94
Zm00001d011924_P001 Maize plastid 22.13 22.78
Zm00001d011925_P001 Maize cytosol 18.03 21.57
Zm00001d042237_P001 Maize mitochondrion 19.26 20.98
Zm00001d011926_P001 Maize cytosol 17.21 20.79
Zm00001d042239_P001 Maize plastid 18.44 20.55
Zm00001d029119_P001 Maize mitochondrion 20.49 20.24
Zm00001d052372_P002 Maize plastid 25.0 19.37
Protein Annotations
EMBL:BT063809EMBL:EU956532EnsemblPlants:Zm00001d000310_P001EnsemblPlants:Zm00001d000310_T001EnsemblPlantsGene:Zm00001d000310EntrezGene:100275527
Gene3D:3.20.90.20InterPro:IPR025659InterPro:IPR038595InterPro:LORInterPro:LOR_sfInterPro:Tubby-like_C
PANTHER:PTHR31087PANTHER:PTHR31087:SF8PFAM:PF04525SEG:segSUPFAM:SSF54518UniParc:UPI000182B363
UniProt:B6SUW7MapMan:35.1::::
Description
Protein LURP-one-related 5
Coordinates
chrB73V4_ctg51:+:15658..16392
Molecular Weight (calculated)
26081.7 Da
IEP (calculated)
4.687
GRAVY (calculated)
-0.226
Length
244 amino acids
Sequence
(BLAST)
001: MSPQSQQQTA IVGEEYCEGE DRELTVRKTT LFTPGDGLEA YDHRTGALAF RVETYGRGGA CGGGAARGDL ALLGAQGEPV LTVRRRRPSL HNRWDGFLGD
101: GAAHGQKKPV FSARRSSILG AGTGAAAVLV DLLAPGAAGE FRVDGSFPRR CCRVVASARA WAAPVAKEEE EEEEEDVVVA EVRRKVDEDA HVMMGRDVFV
201: LWVRAGFDAA FAMGIVLVLD RITGDDVDGD LREDLLEAAT SPPA
Best Arabidopsis Sequence Match ( AT3G15810.1 )
(BLAST)
001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED
Arabidopsis Description
Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.