Factsheet for Bra027206.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30113	Canola	cytosol	96.8	96.8
Bra001606.1-P	Field mustard	cytosol	88.58	91.08
AT3G15810.1	Thale cress	cytosol	89.95	89.55
Bra008497.1-P	Field mustard	cytosol	60.73	63.33
Solyc03g116710.2.1	Tomato	cytosol	56.16	58.29
PGSC0003DMT400001705	Potato	cytosol	56.16	58.29
Bra035195.1-P	Field mustard	cytosol	50.23	52.38
GSMUA_Achr3P13680_001	Banana	cytosol	28.31	47.33
HORVU3Hr1G075150.1	Barley	cytosol	45.21	45.21
TraesCS3B01G340800.1	Wheat	cytosol	45.21	45.0
TraesCS3A01G296300.1	Wheat	cytosol	45.21	45.0
TraesCS3D01G306600.1	Wheat	cytosol	44.75	44.75
EES03690	Sorghum	cytosol	44.29	43.5
Zm00001d043318_P001	Maize	cytosol	44.29	43.5
Os01t0771000-01	Rice	cytosol	43.84	42.29
HORVU1Hr1G077760.1	Barley	cytosol	43.38	41.3
TraesCS1B01G341900.1	Wheat	cytosol	42.01	39.15
TraesCS1D01G330600.1	Wheat	cytosol	42.01	38.98
EES18481	Sorghum	cytosol	42.01	38.17
Zm00001d000310_P001	Maize	cytosol	42.47	38.11
Os05t0510100-01	Rice	cytosol	41.1	37.97
TraesCS1A01G328100.1	Wheat	cytosol	42.01	37.86
Bra017111.1-P	Field mustard	cytosol	31.05	34.69
Bra005092.1-P	Field mustard	cytosol	30.59	34.36
Bra000079.1-P	Field mustard	cytosol	28.77	32.14
Bra000080.1-P	Field mustard	cytosol	28.31	31.79
Bra025487.1-P	Field mustard	cytosol	31.51	30.94
Bra025486.1-P	Field mustard	cytosol	31.51	30.94
Bra027804.1-P	Field mustard	cytosol	24.2	27.75
Bra021544.1-P	Field mustard	cytosol	23.29	24.52
Bra001544.1-P	Field mustard	cytosol	22.83	24.04
Bra039697.1-P	Field mustard	cytosol, extracellular, peroxisome	21.46	23.38
Bra039696.1-P	Field mustard	cytosol	21.46	23.38
Bra039698.1-P	Field mustard	cytosol	21.46	23.38

Protein Annotations

EnsemblPlants:Bra027206.1	EnsemblPlants:Bra027206.1-P	EnsemblPlantsGene:Bra027206	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF2	PFAM:PF04525
SEG:seg	SUPFAM:SSF54518	UniParc:UPI0002547939	UniProt:M4EEJ4	MapMan:35.1	:

Description

AT3G15810 (E=4e-104) | unknown protein

Coordinates

chrA05:+:19705066..19706009

Molecular Weight (calculated)

24890.6 Da

IEP (calculated)

4.581

GRAVY (calculated)

-0.458

Length

219 amino acids

Sequence
(BLAST)

001: MELVEEKKAP KEEKKMGERR VVVDKAYLYD EDKPLTVCKT SLFHTGDGFT AYDCNGDIIF RVDSYGRDND EFVLMDATGK CLLTVKSKRP TLHQRWEGFL
101: GERSDGQKPI FSVRRSSIIG RCTMEVEVYD ESGKEYTIDG DFSLRSCLIY DTEKRTVAEI KRKVDMSTNV MLGRDVFTLE IKPGFDGAFA MGLVLVLDQI
201: NGDDPVEIGD EQVHPFVED

Best Arabidopsis Sequence Match ( AT3G15810.1 )
(BLAST)

001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED

Arabidopsis Description

Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.