Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027206.1-P | Field mustard | cytosol | 96.8 | 96.8 |
| CDX75845 | Canola | cytosol | 88.13 | 90.61 |
| AT3G15810.1 | Thale cress | cytosol | 90.87 | 90.45 |
| CDY58464 | Canola | cytosol | 87.21 | 89.67 |
| CDY41119 | Canola | cytosol | 60.73 | 63.33 |
| CDY37567 | Canola | cytosol | 60.73 | 63.33 |
| Solyc03g116710.2.1 | Tomato | cytosol | 57.53 | 59.72 |
| PGSC0003DMT400001705 | Potato | cytosol | 57.53 | 59.72 |
| CDX87294 | Canola | cytosol | 61.19 | 52.14 |
| GSMUA_Achr3P13680_001 | Banana | cytosol | 29.68 | 49.62 |
| HORVU3Hr1G075150.1 | Barley | cytosol | 45.66 | 45.66 |
| TraesCS3B01G340800.1 | Wheat | cytosol | 45.66 | 45.45 |
| TraesCS3A01G296300.1 | Wheat | cytosol | 45.66 | 45.45 |
| TraesCS3D01G306600.1 | Wheat | cytosol | 45.21 | 45.21 |
| Zm00001d043318_P001 | Maize | cytosol | 44.75 | 43.95 |
| EES03690 | Sorghum | cytosol | 44.75 | 43.95 |
| Os01t0771000-01 | Rice | cytosol | 44.29 | 42.73 |
| HORVU1Hr1G077760.1 | Barley | cytosol | 43.84 | 41.74 |
| TraesCS1B01G341900.1 | Wheat | cytosol | 42.47 | 39.57 |
| TraesCS1D01G330600.1 | Wheat | cytosol | 42.47 | 39.41 |
| EES18481 | Sorghum | cytosol | 42.92 | 39.0 |
| Zm00001d000310_P001 | Maize | cytosol | 43.38 | 38.93 |
| Os05t0510100-01 | Rice | cytosol | 42.01 | 38.82 |
| TraesCS1A01G328100.1 | Wheat | cytosol | 42.47 | 38.27 |
| CDX91482 | Canola | cytosol | 31.51 | 35.38 |
| CDX93313 | Canola | cytosol | 31.05 | 34.69 |
| CDY18377 | Canola | cytosol | 31.05 | 34.69 |
| CDY60759 | Canola | cytosol | 30.59 | 34.36 |
| CDY62436 | Canola | cytosol | 29.68 | 33.16 |
| CDY62435 | Canola | cytosol | 29.22 | 32.82 |
| CDY07715 | Canola | cytosol | 29.22 | 32.65 |
| CDY07714 | Canola | cytosol | 28.77 | 32.31 |
| CDY49893 | Canola | cytosol | 23.74 | 27.23 |
| CDY45367 | Canola | cytosol | 17.35 | 24.68 |
| CDY24068 | Canola | peroxisome | 21.46 | 23.38 |
| CDY71164 | Canola | cytosol, extracellular, peroxisome | 20.09 | 22.92 |
| CDY24067 | Canola | cytosol | 21.0 | 22.89 |
| CDY33238 | Canola | cytosol, peroxisome, plastid | 23.74 | 22.61 |
| CDX75761 | Canola | cytosol | 23.29 | 22.17 |
| CDY67855 | Canola | peroxisome | 23.29 | 22.17 |
| CDX82489 | Canola | cytosol | 22.83 | 21.74 |
| CDY24069 | Canola | cytosol | 16.44 | 20.57 |
| CDY36610 | Canola | cytosol | 12.33 | 18.24 |
| CDY36612 | Canola | cytosol | 10.96 | 17.65 |
Protein Annotations
| EnsemblPlants:CDY30113 | EnsemblPlantsGene:GSBRNA2T00044677001 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF2 | PFAM:PF04525 | ProteinID:CDY30113 |
| ProteinID:CDY30113.1 | SEG:seg | SUPFAM:SSF54518 | UniParc:UPI0000F35E6A | UniProt:A0A078GZW2 | MapMan:35.1 |
Description
BnaC05g37490DBnaC05g37490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZW2]
Coordinates
chrLK032249:-:148240..149542
Molecular Weight (calculated)
24826.5 Da
IEP (calculated)
4.585
GRAVY (calculated)
-0.466
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MELVEEKKAP KEEKKMGERR VVVDKAYLYD EDKPLTVCKT SLFHTGDGFT AYDCNGDIIF RVDSYGRDND ELVLMDATGK CLLTVKRKRP TLHQRWEGFL
101: GERSEGQKPI FSVRRSSIIG RCTMEVEVYD GSGEEYTIDG DFSLRSCLIY DTEKRTVAEI KRKVDMSTNV MLGRDVFALE TKPGFDGAFA MGLVLVLDQI
201: NGDDPVEIGD EQVHPFVED
101: GERSEGQKPI FSVRRSSIIG RCTMEVEVYD GSGEEYTIDG DFSLRSCLIY DTEKRTVAEI KRKVDMSTNV MLGRDVFALE TKPGFDGAFA MGLVLVLDQI
201: NGDDPVEIGD EQVHPFVED
001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED
Arabidopsis Description
Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.