CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62436	Canola	cytosol	99.49	99.49
Bra000079.1-P	Field mustard	cytosol	98.47	98.47
CDY62435	Canola	cytosol	95.92	96.41
CDY07714	Canola	cytosol	95.41	95.9
CDY18377	Canola	cytosol	87.24	87.24
CDX93313	Canola	cytosol	86.73	86.73
CDX91482	Canola	cytosol	85.71	86.15
CDY60759	Canola	cytosol	85.2	85.64
AT2G38640.1	Thale cress	cytosol	84.69	84.69
VIT_08s0032g00760.t01	Wine grape	cytosol	54.08	53.0
GSMUA_Achr6P32380_001	Banana	cytosol	49.49	49.49
VIT_08s0056g00180.t01	Wine grape	cytosol	54.08	49.07
GSMUA_Achr11P...	Banana	cytosol	49.49	48.99
KRH09578	Soybean	cytosol	48.98	46.15
GSMUA_Achr3P09620_001	Banana	nucleus	50.0	46.01
GSMUA_Achr5P07550_001	Banana	cytosol	49.49	45.54
GSMUA_Achr6P15880_001	Banana	plastid	46.94	45.32
GSMUA_Achr7P21880_001	Banana	cytosol	46.43	45.05
GSMUA_Achr10P...	Banana	plastid	46.43	43.54
TraesCSU01G031000.1	Wheat	cytosol	46.43	43.33
GSMUA_Achr4P02410_001	Banana	cytosol, peroxisome, plastid	45.92	43.27
GSMUA_Achr11P...	Banana	cytosol	51.02	42.55
TraesCS4B01G396800.1	Wheat	plastid	45.92	42.45
TraesCS5A01G557700.1	Wheat	cytosol	44.39	42.23
Os05t0311500-01	Rice	cytosol	44.9	40.93
HORVU1Hr1G069180.1	Barley	cytosol, extracellular, plasma membrane	42.86	40.38
TraesCS1A01G303600.1	Wheat	extracellular, plasma membrane	42.35	40.29
TraesCS1B01G314000.1	Wheat	extracellular, plasma membrane	42.35	39.9
TraesCS1D01G303100.1	Wheat	extracellular, plasma membrane	42.35	39.71
TraesCS3A01G340700.1	Wheat	cytosol, extracellular, peroxisome	40.31	39.11
TraesCS3D01G334200.1	Wheat	cytosol	40.31	38.92
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	40.82	38.84
TraesCS3B01G372400.1	Wheat	plastid	40.82	38.84
TraesCS3A01G340800.1	Wheat	cytosol, extracellular, peroxisome	40.82	38.84
TraesCS3B01G372600.1	Wheat	cytosol, extracellular, peroxisome	40.31	38.54
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	40.82	38.46
TraesCS3B01G372300.1	Wheat	cytosol, peroxisome, plastid	39.8	38.42
HORVU4Hr1G047270.1	Barley	cytosol, extracellular, peroxisome	39.8	38.24
Zm00001d044671_P001	Maize	cytosol	42.35	38.07
Os01t0817650-00	Rice	cytosol, extracellular, plastid	41.33	38.03
Os11t0120300-01	Rice	cytosol	42.86	38.01
EES16590	Sorghum	cytosol	43.37	37.78
Os12t0120100-01	Rice	cytosol	42.35	37.39
EES09153	Sorghum	cytosol	44.39	37.34
EES01655	Sorghum	cytosol	39.8	37.32
TraesCS5B01G144000.1	Wheat	cytosol	43.37	37.28
Zm00001d052371_P001	Maize	cytosol	41.84	37.27
EES19708	Sorghum	plastid	42.35	37.05
EES15617	Sorghum	cytosol	43.37	36.96
Zm00001d038514_P001	Maize	plastid	41.84	36.28
TraesCS5D01G147200.1	Wheat	cytosol	41.84	35.96
Os05t0484800-01	Rice	plastid	42.86	35.9
EES16588	Sorghum	cytosol, nucleus, plastid	43.88	35.83
CDY41119	Canola	cytosol	38.27	35.71
CDY37567	Canola	cytosol	38.27	35.71
Zm00001d010627_P001	Maize	cytosol, plastid	40.82	35.4
TraesCS5A01G145200.1	Wheat	cytosol	41.33	35.22
HORVU5Hr1G046200.1	Barley	cytosol	41.84	35.19
Zm00001d043087_P001	Maize	cytosol, extracellular, plastid	37.76	34.91
Zm00001d012520_P001	Maize	cytosol	36.22	34.47
Zm00001d044474_P001	Maize	cytosol	41.33	33.75
GSMUA_Achr9P16860_001	Banana	cytosol	50.0	33.45
HORVU3Hr1G080430.1	Barley	plastid	39.8	33.33
HORVU4Hr1G024080.1	Barley	cytosol	38.78	31.15
TraesCS4D01G121500.1	Wheat	cytosol	38.27	30.74
TraesCS4B01G123400.1	Wheat	cytosol	38.27	30.74
TraesCS4A01G192000.1	Wheat	cytosol	37.76	30.33
EES09152	Sorghum	plastid	38.27	30.0
CDY30113	Canola	cytosol	32.65	29.22
CDX87294	Canola	cytosol	37.76	28.79
CDY58464	Canola	cytosol	31.12	28.64
CDX75845	Canola	cytosol	31.12	28.64
TraesCS3A01G340900.1	Wheat	mitochondrion	39.8	28.16
HORVU3Hr1G080440.1	Barley	plastid	39.8	27.27
CDY45367	Canola	cytosol	21.43	27.27
Zm00001d052372_P002	Maize	plastid	41.33	25.71
CDY49893	Canola	cytosol	25.0	25.65
CDY71164	Canola	cytosol, extracellular, peroxisome	24.49	25.0
CDY24068	Canola	peroxisome	25.51	24.88
CDY24067	Canola	cytosol	25.0	24.38
CDY67855	Canola	peroxisome	27.55	23.48
CDX75761	Canola	cytosol	27.55	23.48
CDY33238	Canola	cytosol, peroxisome, plastid	27.55	23.48
CDX82489	Canola	cytosol	27.04	23.04
HORVU4Hr1G089220.1	Barley	plasma membrane	29.08	21.76
CDY24069	Canola	cytosol	18.37	20.57
CDY36610	Canola	cytosol	14.8	19.59
CDY36612	Canola	cytosol	13.27	19.12

Protein Annotations

EnsemblPlants:CDY07715	EnsemblPlantsGene:GSBRNA2T00124832001	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF22	PFAM:PF04525	ProteinID:CDY07715
ProteinID:CDY07715.1	SUPFAM:SSF54518	UniParc:UPI0004EE96D2	UniProt:A0A078F017	MapMan:35.1	:

Description

BnaA03g17960DBnaA03g17960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F017]

Coordinates

chrLK031980:+:590800..591778

Molecular Weight (calculated)

22282.2 Da

IEP (calculated)

10.123

GRAVY (calculated)

-0.283

Length

196 amino acids

Sequence
(BLAST)

001: MTKVHPKFPN TYEESLCDSK AAVVLTVWRK SLLFNCDGFT VYNSNGNLVF RVDNYMNSTR DNIVLMDASG LPLLSIRRKK LSMGDCWAVY DGETQRDPIF
101: TAKKNVSILT NKRSLAWVSA KKTILYEVEG SYGQRSCKIV DVRRNKKKTA EIKRKDAMVG GGSFGKDVFK LIVEPEMEPR VAMALTIILD KMFRSY

Best Arabidopsis Sequence Match ( AT2G38640.1 )
(BLAST)

001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS

Arabidopsis Description

Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.