Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G031000.1 | Wheat | cytosol | 92.92 | 93.81 |
| TraesCS5A01G557700.1 | Wheat | cytosol | 90.57 | 93.2 |
| Os05t0311500-01 | Rice | cytosol | 71.7 | 70.7 |
| GSMUA_Achr11P... | Banana | cytosol | 49.06 | 52.53 |
| GSMUA_Achr7P21880_001 | Banana | cytosol | 49.53 | 51.98 |
| GSMUA_Achr4P02410_001 | Banana | cytosol, peroxisome, plastid | 49.06 | 50.0 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 45.75 | 48.5 |
| CDY07714 | Canola | cytosol | 42.92 | 46.67 |
| CDY62435 | Canola | cytosol | 42.92 | 46.67 |
| TraesCS1B01G314000.1 | Wheat | extracellular, plasma membrane | 45.75 | 46.63 |
| CDY62436 | Canola | cytosol | 42.92 | 46.43 |
| GSMUA_Achr10P... | Banana | plastid | 45.75 | 46.41 |
| Bra000080.1-P | Field mustard | cytosol | 42.45 | 46.15 |
| CDY07715 | Canola | cytosol | 42.45 | 45.92 |
| AT2G38640.1 | Thale cress | cytosol | 42.45 | 45.92 |
| Bra000079.1-P | Field mustard | cytosol | 42.45 | 45.92 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 46.7 | 45.83 |
| CDX91482 | Canola | cytosol | 41.98 | 45.64 |
| Bra005092.1-P | Field mustard | cytosol | 41.51 | 45.13 |
| Bra017111.1-P | Field mustard | cytosol | 41.51 | 44.9 |
| CDY18377 | Canola | cytosol | 41.04 | 44.39 |
| CDY60759 | Canola | cytosol | 40.57 | 44.1 |
| CDX93313 | Canola | cytosol | 40.57 | 43.88 |
| TraesCS3B01G372400.1 | Wheat | plastid | 42.45 | 43.69 |
| KRH09578 | Soybean | cytosol | 41.98 | 42.79 |
| TraesCS3B01G372600.1 | Wheat | cytosol, extracellular, peroxisome | 41.04 | 42.44 |
| TraesCS5B01G144000.1 | Wheat | cytosol | 45.28 | 42.11 |
| TraesCS3B01G372300.1 | Wheat | cytosol, peroxisome, plastid | 40.09 | 41.87 |
| GSMUA_Achr11P... | Banana | cytosol | 46.23 | 41.7 |
| TraesCS4B01G123400.1 | Wheat | cytosol | 44.81 | 38.93 |
| HORVU4Hr1G089220.1 | Barley | plasma membrane | 47.64 | 38.55 |
| TraesCS3B01G487200.1 | Wheat | cytosol | 26.42 | 28.57 |
| TraesCS3B01G486300.1 | Wheat | plastid | 25.47 | 27.55 |
| TraesCS3B01G340800.1 | Wheat | cytosol | 28.3 | 27.27 |
| TraesCS3B01G486900.1 | Wheat | cytosol, plastid | 24.06 | 26.02 |
| TraesCS1B01G341900.1 | Wheat | cytosol | 28.77 | 25.96 |
| TraesCS3B01G487000.1 | Wheat | plastid | 23.58 | 25.51 |
| TraesCS3B01G486200.1 | Wheat | plastid | 23.58 | 25.13 |
| TraesCS3B01G486600.1 | Wheat | cytosol | 23.11 | 24.87 |
| TraesCS2B01G132800.1 | Wheat | plastid | 23.58 | 23.36 |
| TraesCS5B01G143600.1 | Wheat | mitochondrion | 26.89 | 22.98 |
| TraesCS4B01G155500.1 | Wheat | cytosol, mitochondrion | 26.89 | 22.8 |
| TraesCS3B01G486800.1 | Wheat | plastid | 24.06 | 22.57 |
| TraesCS5B01G143700.1 | Wheat | plastid | 27.36 | 21.97 |
| TraesCS3B01G487100.1 | Wheat | plastid | 19.34 | 19.62 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G396800.1 | EnsemblPlantsGene:TraesCS4B01G396800 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF29 | PFAM:PF04525 | SEG:seg |
| SUPFAM:SSF54518 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:671180467..671181976
Molecular Weight (calculated)
22897.5 Da
IEP (calculated)
9.823
GRAVY (calculated)
-0.178
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MNKTKVHPNV AAASPAVPAA AGEKGEAVSL TVWRRSLLFN GKGFTVFDTN GNLVFRVETY ARGGSPREVV LMDAEGVALL TVRRKKLSLA EEWLVYDGDG
101: DEPAPRRFTA RRNRSLLRTK SLARLSPPRS LDGTGDVPGC RYDVEGSYAG RSLDMFACTS SASGGNQRRR VASVCRKEAA VGLDVFRLVV EPDLEPALAM
201: AVVILLDQMN AS
101: DEPAPRRFTA RRNRSLLRTK SLARLSPPRS LDGTGDVPGC RYDVEGSYAG RSLDMFACTS SASGGNQRRR VASVCRKEAA VGLDVFRLVV EPDLEPALAM
201: AVVILLDQMN AS
001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
Arabidopsis Description
Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.