Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G031000.1 | Wheat | cytosol | 38.55 | 48.1 |
| TraesCS4B01G396800.1 | Wheat | plastid | 38.55 | 47.64 |
| TraesCS5A01G557700.1 | Wheat | cytosol | 36.26 | 46.12 |
| Os05t0311500-01 | Rice | cytosol | 33.97 | 41.4 |
| GSMUA_Achr11P... | Banana | cytosol | 24.43 | 32.32 |
| GSMUA_Achr7P21880_001 | Banana | cytosol | 24.81 | 32.18 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 24.05 | 31.5 |
| GSMUA_Achr4P02410_001 | Banana | cytosol, peroxisome, plastid | 24.81 | 31.25 |
| HORVU1Hr1G069180.1 | Barley | cytosol, extracellular, plasma membrane | 24.43 | 30.77 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 24.81 | 30.09 |
| CDY62436 | Canola | cytosol | 22.14 | 29.59 |
| CDX91482 | Canola | cytosol | 21.76 | 29.23 |
| Bra000079.1-P | Field mustard | cytosol | 21.76 | 29.08 |
| CDY07715 | Canola | cytosol | 21.76 | 29.08 |
| Bra005092.1-P | Field mustard | cytosol | 21.37 | 28.72 |
| Bra017111.1-P | Field mustard | cytosol | 21.37 | 28.57 |
| HORVU4Hr1G047270.1 | Barley | cytosol, extracellular, peroxisome | 22.14 | 28.43 |
| CDY62435 | Canola | cytosol | 20.99 | 28.21 |
| Bra000080.1-P | Field mustard | cytosol | 20.99 | 28.21 |
| CDY07714 | Canola | cytosol | 20.99 | 28.21 |
| AT2G38640.1 | Thale cress | cytosol | 20.99 | 28.06 |
| CDY18377 | Canola | cytosol | 20.99 | 28.06 |
| HORVU3Hr1G097510.1 | Barley | plastid | 12.6 | 27.97 |
| GSMUA_Achr10P... | Banana | plastid | 22.14 | 27.75 |
| CDY60759 | Canola | cytosol | 20.61 | 27.69 |
| CDX93313 | Canola | cytosol | 20.61 | 27.55 |
| KRH09578 | Soybean | cytosol | 21.37 | 26.92 |
| HORVU5Hr1G046200.1 | Barley | cytosol | 23.66 | 26.61 |
| HORVU4Hr1G024080.1 | Barley | cytosol | 24.43 | 26.23 |
| GSMUA_Achr11P... | Banana | cytosol | 23.28 | 25.96 |
| HORVU3Hr1G080430.1 | Barley | plastid | 22.14 | 24.79 |
| HORVU3Hr1G080440.1 | Barley | plastid | 23.28 | 21.33 |
| HORVU3Hr1G075150.1 | Barley | cytosol | 17.56 | 21.0 |
| HORVU3Hr1G097270.1 | Barley | plastid | 14.89 | 20.21 |
| HORVU3Hr1G097260.1 | Barley | cytosol | 14.5 | 19.69 |
| HORVU3Hr1G097390.1 | Barley | plastid | 14.89 | 19.31 |
| HORVU3Hr1G097470.1 | Barley | plastid | 16.03 | 19.27 |
| HORVU3Hr1G097460.1 | Barley | mitochondrion, plastid | 15.27 | 18.87 |
| HORVU1Hr1G077760.1 | Barley | cytosol | 15.65 | 17.83 |
| HORVU3Hr1G097400.6 | Barley | cytosol, mitochondrion, plastid | 14.5 | 17.59 |
| HORVU6Hr1G081400.1 | Barley | mitochondrion | 16.79 | 17.39 |
| HORVU2Hr1G019720.1 | Barley | plastid | 13.36 | 16.75 |
| HORVU5Hr1G046140.1 | Barley | mitochondrion | 14.5 | 15.64 |
| HORVU5Hr1G046160.1 | Barley | mitochondrion | 14.12 | 9.74 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G089220.1 | EnsemblPlantsGene:HORVU4Hr1G089220 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF29 | PFAM:PF04525 | SEG:seg |
| SUPFAM:SSF54518 | UniParc:UPI000B46CA04 | UniProt:A0A287Q364 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr4H:+:641910066..641911699
Molecular Weight (calculated)
27965.6 Da
IEP (calculated)
11.400
GRAVY (calculated)
-0.213
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MTRVKVHPNA AAASLAVVPA AEEKGEAVSL TVWRRSLLFN GKGFTVFDSN GNLVFRVETY ARGSPSEVVL MDADGLALLT VRRKVCAYSS FFACPICSLI
101: RWDLKSHVGL VVRDGGAEAE FGGGVARLRR RRRRAGAQAI HGAAEHESAP DKVPLSPVAG AIAGRYDWGC AWLPVPCGGV VRQSQPPHVR LHRRQSAAAR
201: GHGVPEGGRH RTGRVPADGG ARLRAGAGHG RGHTPRSDER VLIEASIRSR QQPCMPAAST LL
101: RWDLKSHVGL VVRDGGAEAE FGGGVARLRR RRRRAGAQAI HGAAEHESAP DKVPLSPVAG AIAGRYDWGC AWLPVPCGGV VRQSQPPHVR LHRRQSAAAR
201: GHGVPEGGRH RTGRVPADGG ARLRAGAGHG RGHTPRSDER VLIEASIRSR QQPCMPAAST LL
001: MFPFLKQRSR SVHGEDAPSS TESTVSVAAA DIGGACTTLT VWRKSLLVSC EGFTVIDSNG DLIYRVDNYA RTRPEELILM DKDGNSLLLM HRTKKITLVD
101: SWGIYEANDT KGETKIPKCP TWYMRKNLKM NILSTKSDIL AYVYSGSFDK KNSYIIKGSY RCKSCKIVHV PLNKTVVEIK RKEVRTKGVR FGSDVFDLVV
201: NPGFDTGLAM ALVLLLDQMF S
101: SWGIYEANDT KGETKIPKCP TWYMRKNLKM NILSTKSDIL AYVYSGSFDK KNSYIIKGSY RCKSCKIVHV PLNKTVVEIK RKEVRTKGVR FGSDVFDLVV
201: NPGFDTGLAM ALVLLLDQMF S
Arabidopsis Description
Protein LURP-one-related 17 [Source:UniProtKB/Swiss-Prot;Acc:A0MFL4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.