Factsheet for HORVU3Hr1G075150.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80120.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT1G80120.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT1G80120.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT1G80120.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT1G80120.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT1G80120.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT1G80120.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT1G80120.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT1G80120.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT1G80120.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT1G80120.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT1G80120.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT1G80120.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT1G80120.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT1G80120.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT1G80120.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G306600.1	Wheat	cytosol	96.8	96.8
TraesCS3B01G340800.1	Wheat	cytosol	96.8	96.36
TraesCS3A01G296300.1	Wheat	cytosol	96.35	95.91
Os01t0771000-01	Rice	cytosol	84.93	81.94
EES03690	Sorghum	cytosol	81.28	79.82
Zm00001d043318_P001	Maize	cytosol	79.45	78.03
HORVU1Hr1G077760.1	Barley	cytosol	65.75	62.61
GSMUA_Achr3P13680_001	Banana	cytosol	33.33	55.73
VIT_09s0002g06920.t01	Wine grape	cytosol	47.95	50.72
Solyc03g116710.2.1	Tomato	cytosol	47.49	49.29
PGSC0003DMT400001705	Potato	cytosol	47.03	48.82
AT1G80120.1	Thale cress	cytosol	46.58	48.57
CDY41119	Canola	cytosol	46.12	48.1
CDY37567	Canola	cytosol	46.12	48.1
Bra008497.1-P	Field mustard	cytosol	46.12	48.1
KRH44464	Soybean	cytosol	47.95	47.95
KRH47444	Soybean	cytosol	47.49	47.49
KRH09722	Soybean	cytosol	47.49	47.49
CDY58464	Canola	cytosol	46.12	47.42
KRH23583	Soybean	cytosol	47.49	47.27
Bra001606.1-P	Field mustard	cytosol	45.66	46.95
CDX75845	Canola	cytosol	45.21	46.48
CDY30113	Canola	cytosol	45.66	45.66
Bra027206.1-P	Field mustard	cytosol	45.21	45.21
AT3G15810.1	Thale cress	cytosol	44.75	44.55
CDX87294	Canola	cytosol	44.75	38.13
Bra035195.1-P	Field mustard	cytosol	35.62	37.14
HORVU4Hr1G047270.1	Barley	cytosol, extracellular, peroxisome	27.85	29.9
HORVU4Hr1G024080.1	Barley	cytosol	31.96	28.69
HORVU5Hr1G046200.1	Barley	cytosol	30.14	28.33
HORVU1Hr1G069180.1	Barley	cytosol, extracellular, plasma membrane	26.48	27.88
HORVU3Hr1G097270.1	Barley	plastid	23.29	26.42
HORVU3Hr1G097260.1	Barley	cytosol	23.29	26.42
HORVU3Hr1G080430.1	Barley	plastid	27.85	26.07
HORVU3Hr1G097390.1	Barley	plastid	23.74	25.74
HORVU3Hr1G097510.1	Barley	plastid	13.7	25.42
HORVU5Hr1G046140.1	Barley	mitochondrion	27.4	24.69
HORVU3Hr1G097460.1	Barley	mitochondrion, plastid	23.74	24.53
HORVU2Hr1G019720.1	Barley	plastid	22.37	23.45
HORVU3Hr1G097470.1	Barley	plastid	23.29	23.39
HORVU3Hr1G097400.6	Barley	cytosol, mitochondrion, plastid	21.92	22.22
HORVU3Hr1G080440.1	Barley	plastid	27.85	21.33
HORVU5Hr1G046160.1	Barley	mitochondrion	32.88	18.95
HORVU4Hr1G089220.1	Barley	plasma membrane	21.0	17.56
HORVU6Hr1G081400.1	Barley	mitochondrion	17.81	15.41

Protein Annotations

EMBL:AK360489	EMBL:AK373326	EnsemblPlants:HORVU3Hr1G075150.1	EnsemblPlantsGene:HORVU3Hr1G075150	Gene3D:3.20.90.20	InterPro:IPR025659
InterPro:IPR038595	InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF8
PFAM:PF04525	SEG:seg	SUPFAM:SSF54518	UniParc:UPI0002005837	UniProt:F2D9C7	MapMan:35.1

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D9C7]

Coordinates

chrchr3H:-:561960823..561962277

Molecular Weight (calculated)

23222.6 Da

IEP (calculated)

6.938

GRAVY (calculated)

-0.144

Length

219 amino acids

Sequence
(BLAST)

001: MAVVGEEYCD LKERLLTVRK TSHFSPGDGF AAYDNRTGGL AFRADTYGRG HGGGAASPGE LALLGPAGEP LLTVRRRRPS LHQRWEGFLG ARADGQKSLF
101: SARRSSILGG AGRGAVVELL PSPASAAAAE LRVEGSFSRR CCRVVAKGED GEETVVAEIR RKVDEVARVV MGRDVFVLRV GAGFDAAFAM GIVLVLDQIT
201: GDEADGDDAA QDPVHAKIW

Best Arabidopsis Sequence Match ( AT3G15810.1 )
(BLAST)

001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED

Arabidopsis Description

Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.