Factsheet for Bra001606.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75845	Canola	cytosol	99.06	99.06
CDY58464	Canola	cytosol	98.12	98.12
AT3G15810.1	Thale cress	cytosol	93.43	90.45
Bra027206.1-P	Field mustard	cytosol	91.08	88.58
Bra008497.1-P	Field mustard	cytosol	62.44	63.33
Solyc03g116710.2.1	Tomato	cytosol	58.69	59.24
PGSC0003DMT400001705	Potato	cytosol	58.69	59.24
Bra035195.1-P	Field mustard	cytosol	51.17	51.9
GSMUA_Achr3P13680_001	Banana	cytosol	30.52	49.62
HORVU3Hr1G075150.1	Barley	cytosol	46.95	45.66
TraesCS3B01G340800.1	Wheat	cytosol	46.95	45.45
TraesCS3A01G296300.1	Wheat	cytosol	46.95	45.45
TraesCS3D01G306600.1	Wheat	cytosol	46.48	45.21
Zm00001d043318_P001	Maize	cytosol	46.01	43.95
EES03690	Sorghum	cytosol	45.54	43.5
Os01t0771000-01	Rice	cytosol	46.01	43.17
HORVU1Hr1G077760.1	Barley	cytosol	43.66	40.43
TraesCS1B01G341900.1	Wheat	cytosol	42.72	38.72
TraesCS1D01G330600.1	Wheat	cytosol	42.72	38.56
Zm00001d000310_P001	Maize	cytosol	43.66	38.11
Os05t0510100-01	Rice	cytosol	42.25	37.97
EES18481	Sorghum	cytosol	42.72	37.76
TraesCS1A01G328100.1	Wheat	cytosol	42.72	37.45
Bra017111.1-P	Field mustard	cytosol	31.46	34.18
Bra005092.1-P	Field mustard	cytosol	30.99	33.85
Bra000079.1-P	Field mustard	cytosol	29.11	31.63
Bra000080.1-P	Field mustard	cytosol	28.64	31.28
Bra025486.1-P	Field mustard	cytosol	31.46	30.04
Bra025487.1-P	Field mustard	cytosol	31.46	30.04
Bra027804.1-P	Field mustard	cytosol	24.88	27.75
Bra021544.1-P	Field mustard	cytosol	23.47	24.04
Bra001544.1-P	Field mustard	cytosol	23.0	23.56
Bra039696.1-P	Field mustard	cytosol	22.07	23.38
Bra039698.1-P	Field mustard	cytosol	22.07	23.38
Bra039697.1-P	Field mustard	cytosol, extracellular, peroxisome	22.07	23.38

Protein Annotations

EnsemblPlants:Bra001606.1	EnsemblPlants:Bra001606.1-P	EnsemblPlantsGene:Bra001606	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF2	PFAM:PF04525
SUPFAM:SSF54518	UniParc:UPI0002540A4B	UniProt:M4CBM6	MapMan:35.1	:	:

Description

AT3G15810 (E=2e-111) | unknown protein

Coordinates

chrA03:-:17364774..17366386

Molecular Weight (calculated)

24119.6 Da

IEP (calculated)

4.382

GRAVY (calculated)

-0.347

Length

213 amino acids

Sequence
(BLAST)

001: MELVEEMGEK RVVVDKAYIY EEDKPLTVCK TSLFYTGDGF AAYDCHGDII FRVDSYGPDT RDNDEFVLMD VAGKCLLTVK RKRPTLHQRW EGFLGERSDG
101: QKPIFSVRRS SIIGRCTMEV EVYDGTGEEY TIDGDFSQRS CLIYDTNKRT VAEIKRKVDA STNVMLGRDV FTLEIKPGFD GAFVMGLVLV LDQINGDDPV
201: EIGDEQVHPF VED

Best Arabidopsis Sequence Match ( AT3G15810.1 )
(BLAST)

001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED

Arabidopsis Description

Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.