Factsheet for Zm00001d043318_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80120.1	Zm00001d005003_P002	AT2G41090.1	17360592
AT1G80120.1	Zm00001d008278_P001	AT2G41090.1	17360592
AT1G80120.1	Zm00001d010649_P001	AT2G41090.1	17360592
AT1G80120.1	Zm00001d028948_P001	AT2G41090.1	17360592
AT1G80120.1	Zm00001d038543_P004	AT2G41090.1	17360592
AT1G80120.1	Zm00001d038545_P001	AT2G41090.1	17360592
AT1G80120.1	Zm00001d041430_P001	AT2G41090.1	17360592
AT1G80120.1	Zm00001d043144_P001	AT2G41090.1	17360592
AT1G80120.1	Zm00001d047597_P001	AT2G41090.1	17360592
AT1G80120.1	Zm00001d052415_P001	AT2G41090.1	17360592
AT1G80120.1	Zm00001d005003_P002	AT5G21274.1	17360592
AT1G80120.1	Zm00001d008278_P001	AT5G21274.1	17360592
AT1G80120.1	Zm00001d010649_P001	AT5G21274.1	17360592
AT1G80120.1	Zm00001d028948_P001	AT5G21274.1	17360592
AT1G80120.1	Zm00001d038543_P004	AT5G21274.1	17360592
AT1G80120.1	Zm00001d038545_P001	AT5G21274.1	17360592
AT1G80120.1	Zm00001d041430_P001	AT5G21274.1	17360592
AT1G80120.1	Zm00001d043144_P001	AT5G21274.1	17360592
AT1G80120.1	Zm00001d047597_P001	AT5G21274.1	17360592
AT1G80120.1	Zm00001d052415_P001	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03690	Sorghum	cytosol	91.93	91.93
TraesCS3D01G306600.1	Wheat	cytosol	78.48	79.91
TraesCS3A01G296300.1	Wheat	cytosol	78.48	79.55
HORVU3Hr1G075150.1	Barley	cytosol	78.03	79.45
TraesCS3B01G340800.1	Wheat	cytosol	78.03	79.09
Os01t0771000-01	Rice	cytosol	80.27	78.85
Zm00001d000310_P001	Maize	cytosol	64.13	58.61
GSMUA_Achr3P13680_001	Banana	cytosol	32.29	54.96
VIT_09s0002g06920.t01	Wine grape	cytosol	44.39	47.83
KRH09722	Soybean	cytosol	46.64	47.49
Solyc03g116710.2.1	Tomato	cytosol	44.84	47.39
PGSC0003DMT400001705	Potato	cytosol	44.84	47.39
AT1G80120.1	Thale cress	cytosol	44.39	47.14
KRH23583	Soybean	cytosol	46.19	46.82
KRH44464	Soybean	cytosol	45.74	46.58
CDY58464	Canola	cytosol	44.39	46.48
KRH47444	Soybean	cytosol	45.29	46.12
Bra001606.1-P	Field mustard	cytosol	43.95	46.01
Bra008497.1-P	Field mustard	cytosol	43.05	45.71
CDY41119	Canola	cytosol	43.05	45.71
CDY37567	Canola	cytosol	43.05	45.71
CDX75845	Canola	cytosol	43.5	45.54
CDY30113	Canola	cytosol	43.95	44.75
Bra027206.1-P	Field mustard	cytosol	43.5	44.29
AT3G15810.1	Thale cress	cytosol	43.05	43.64
CDX87294	Canola	cytosol	41.7	36.19
Bra035195.1-P	Field mustard	cytosol	32.29	34.29
Zm00001d044671_P001	Maize	cytosol	30.04	30.73
Zm00001d043087_P001	Maize	cytosol, extracellular, plastid	28.25	29.72
Zm00001d012520_P001	Maize	cytosol	26.91	29.13
Zm00001d052371_P001	Maize	cytosol	28.25	28.64
Zm00001d044474_P001	Maize	cytosol	29.6	27.5
Zm00001d052373_P001	Maize	plastid	31.84	27.0
Zm00001d038514_P001	Maize	plastid	27.35	26.99
Zm00001d010627_P001	Maize	cytosol, plastid	26.91	26.55
Zm00001d005038_P001	Maize	plastid	30.04	26.27
Zm00001d023305_P001	Maize	plastid	30.94	26.04
Zm00001d044670_P001	Maize	nucleus	31.39	25.09
Zm00001d011925_P001	Maize	cytosol	21.97	24.02
Zm00001d042237_P001	Maize	mitochondrion	22.42	22.32
Zm00001d011924_P001	Maize	plastid	23.32	21.94
Zm00001d011926_P001	Maize	cytosol	19.73	21.78
Zm00001d042239_P001	Maize	plastid	20.18	20.55
Zm00001d029119_P001	Maize	mitochondrion	20.63	18.62
Zm00001d052372_P002	Maize	plastid	26.01	18.41

Protein Annotations

EMBL:EU956355	EnsemblPlants:Zm00001d043318_P001	EnsemblPlants:Zm00001d043318_T001	EnsemblPlantsGene:Zm00001d043318	EntrezGene:100275502	Gene3D:3.20.90.20
InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087
PANTHER:PTHR31087:SF8	PFAM:PF04525	ProteinID:ONM37540.1	SEG:seg	SUPFAM:SSF54518	UniParc:UPI000182AFF8
UniProt:B6SUE0	MapMan:35.1	:	:	:	:

Description

Protein LURP-one-related 5

Coordinates

chr3:+:196323342..196324013

Molecular Weight (calculated)

23351.1 Da

IEP (calculated)

8.874

GRAVY (calculated)

0.030

Length

223 amino acids

Sequence
(BLAST)

001: MAIVGAEYCD PEERVLTVRK TSHFSPGDGF AAYDHRTGGL SFRADTYGRG HGGGAASAGE LALLGPAGEP LLTVRRRRPS LHQRWEGFLG ARADGQKAIF
101: SARRPSILGG AAAGAVIELL PPAPAAAPVL LRVDGSFPRR CCRVVLAPRA EGEKAKVVAE IGRKVDEGAR VVMGRDVFVL RVSPGFDAAF AMGIVLVLDQ
201: IVGDESGGVD AGADVIDAKP KVW

Best Arabidopsis Sequence Match ( AT3G15810.1 )
(BLAST)

001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED

Arabidopsis Description

Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.