Factsheet for Zm00001d023305_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044670_P001	Maize	nucleus	84.53	80.29
EES15616	Sorghum	plastid	88.3	75.0
TraesCS5D01G147400.1	Wheat	plastid	60.0	60.46
TraesCS5B01G143700.1	Wheat	plastid	59.62	59.85
Zm00001d052373_P001	Maize	plastid	52.08	52.47
Zm00001d005038_P001	Maize	plastid	48.68	50.59
GSMUA_Achr11P...	Banana	cytosol	38.49	49.76
GSMUA_Achr7P21840_001	Banana	cytosol	38.11	49.03
TraesCS5A01G145000.1	Wheat	nucleus, plastid	60.0	44.54
VIT_08s0056g00130.t01	Wine grape	cytosol	38.49	42.86
PGSC0003DMT400030793	Potato	cytosol	33.58	41.78
HORVU5Hr1G046160.1	Barley	mitochondrion	59.62	41.58
Solyc09g005210.2.1	Tomato	nucleus	38.11	38.55
GSMUA_Achr4P02400_001	Banana	cytosol	34.34	37.92
Zm00001d044671_P001	Maize	cytosol	28.3	34.4
Zm00001d052371_P001	Maize	cytosol	28.3	34.09
Zm00001d044474_P001	Maize	cytosol	30.57	33.75
Zm00001d043087_P001	Maize	cytosol, extracellular, plastid	26.79	33.49
Zm00001d012520_P001	Maize	cytosol	25.28	32.52
Zm00001d043318_P001	Maize	cytosol	26.04	30.94
Zm00001d011926_P001	Maize	cytosol	22.26	29.21
Zm00001d010627_P001	Maize	cytosol, plastid	24.53	28.76
Zm00001d011925_P001	Maize	cytosol	21.89	28.43
Zm00001d038514_P001	Maize	plastid	24.15	28.32
Zm00001d042237_P001	Maize	mitochondrion	23.4	27.68
Zm00001d000310_P001	Maize	cytosol	24.91	27.05
Zm00001d042239_P001	Maize	plastid	22.26	26.94
Zm00001d052372_P002	Maize	plastid	28.68	24.13
Zm00001d011924_P001	Maize	plastid	21.13	23.63
Zm00001d029119_P001	Maize	mitochondrion	21.13	22.67

Protein Annotations

EnsemblPlants:Zm00001d023305_P001	EnsemblPlants:Zm00001d023305_T001	EnsemblPlantsGene:Zm00001d023305	EntrezGene:103640693	Gene3D:3.20.90.20	InterPro:IPR025659
InterPro:IPR038595	InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF26
PFAM:PF04525	ProteinID:AQK38916.1	SEG:seg	SUPFAM:SSF54518	UniParc:UPI00022173D6	UniProt:K7TLU5
MapMan:35.2	:	:	:	:	:

Description

Protein LURP-one-related 2

Coordinates

chr10:+:2593317..2594522

Molecular Weight (calculated)

28758.1 Da

IEP (calculated)

10.383

GRAVY (calculated)

-0.421

Length

265 amino acids

Sequence
(BLAST)

001: MSTRIHPSSS DAAGRAHRRR RAAAAERERR PPAVYTVWKR SSMGFQGTDG FCVYDDAGRL AFRVDNYSRR RKLCAGDLLL MDGQGTPLLS LRPQLLSLHD
101: RWNCYTATED AVVDKKAPPA SSAQQQVFTM SRCSALRSSS DNAEVHMSAS RPGSAAAASS SSSSLSLSCN KHNPQAAAPG YRVEGSFSRR SCKIRRGSDG
201: REAARITRKS AGVASRPVAT LGDDDVFSLV VRPGVDVATV MAIVVVMDRI CRRPYTPMVC PSQCE

Best Arabidopsis Sequence Match ( AT2G38640.1 )
(BLAST)

001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS

Arabidopsis Description

Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.