Factsheet for Zm00001d052373_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09154	Sorghum	plastid	80.61	74.13
Zm00001d005038_P001	Maize	plastid	56.27	58.04
Zm00001d023305_P001	Maize	plastid	52.47	52.08
GSMUA_Achr11P...	Banana	cytosol	40.3	51.71
GSMUA_Achr7P21840_001	Banana	cytosol	38.78	49.51
Zm00001d044670_P001	Maize	nucleus	52.09	49.1
VIT_08s0056g00130.t01	Wine grape	cytosol	40.68	44.96
GSMUA_Achr4P02400_001	Banana	cytosol	36.88	40.42
PGSC0003DMT400030793	Potato	cytosol	31.94	39.44
Solyc09g005210.2.1	Tomato	nucleus	34.6	34.73
Zm00001d044671_P001	Maize	cytosol	28.14	33.95
Zm00001d043087_P001	Maize	cytosol, extracellular, plastid	25.86	32.08
Zm00001d043318_P001	Maize	cytosol	27.0	31.84
Zm00001d052371_P001	Maize	cytosol	26.24	31.36
Zm00001d010627_P001	Maize	cytosol, plastid	25.48	29.65
Zm00001d011925_P001	Maize	cytosol	22.81	29.41
Zm00001d038514_P001	Maize	plastid	25.1	29.2
Zm00001d044474_P001	Maize	cytosol	26.62	29.17
Zm00001d042237_P001	Maize	mitochondrion	24.71	29.02
Zm00001d012520_P001	Maize	cytosol	22.43	28.64
Zm00001d000310_P001	Maize	cytosol	24.33	26.23
Zm00001d011924_P001	Maize	plastid	23.57	26.16
Zm00001d011926_P001	Maize	cytosol	19.77	25.74
Zm00001d042239_P001	Maize	plastid	21.29	25.57
Zm00001d029119_P001	Maize	mitochondrion	20.53	21.86
Zm00001d052372_P002	Maize	plastid	25.1	20.95

Protein Annotations

EnsemblPlants:Zm00001d052373_P001	EnsemblPlants:Zm00001d052373_T001	EnsemblPlantsGene:Zm00001d052373	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF26	PFAM:PF04525
ProteinID:AQK57069.1	SEG:seg	SUPFAM:SSF54518	UniParc:UPI000842C8FB	UniProt:A0A1D6QGP9	MapMan:35.2

Description

Protein LURP-one-related 2

Coordinates

chr4:-:188401588..188403066

Molecular Weight (calculated)

28468.8 Da

IEP (calculated)

10.048

GRAVY (calculated)

-0.327

Length

263 amino acids

Sequence
(BLAST)

001: MHPVPPRSST TSSIAASATR VHPSDAVGGR ATAASSGLQG QAPAVYTVWK RSSMGFQGTD GFSVYDATGS LAFRVDNYSR RRKLFAGELL LMDGRGAPLL
101: ALRPQILSMR DQWNCYRATS EEPSGDNDQS FRRRRRQQQL FFSMRQCSLV RGTDEVEVHM AAASGTSAAQ QQVPSFTVQG SFWRRSCKIR RGGDGDGDGE
201: EVARISRKKA AGAAPAPVTL GEDVFSLTVV PGADCAMVMA FVVVMDRICQ RPYRPLMCSA SSS

Best Arabidopsis Sequence Match ( AT2G38640.1 )
(BLAST)

001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS

Arabidopsis Description

Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.