Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d052371_P001 | Maize | cytosol | 60.0 | 85.91 |
| EES09153 | Sorghum | cytosol | 50.48 | 68.24 |
| Zm00001d044671_P001 | Maize | cytosol | 41.27 | 59.63 |
| TraesCS5D01G147200.1 | Wheat | cytosol | 41.9 | 57.89 |
| TraesCS5B01G144000.1 | Wheat | cytosol | 41.9 | 57.89 |
| Os11t0120300-01 | Rice | cytosol | 40.32 | 57.47 |
| Os12t0120100-01 | Rice | cytosol | 40.0 | 56.76 |
| TraesCS5A01G145200.1 | Wheat | cytosol | 41.27 | 56.52 |
| HORVU5Hr1G046200.1 | Barley | cytosol | 41.27 | 55.79 |
| Zm00001d044474_P001 | Maize | cytosol | 41.59 | 54.58 |
| TraesCS4A01G192000.1 | Wheat | cytosol | 40.63 | 52.46 |
| TraesCS4B01G123400.1 | Wheat | cytosol | 40.32 | 52.05 |
| TraesCS4D01G121500.1 | Wheat | cytosol | 40.32 | 52.05 |
| HORVU4Hr1G024080.1 | Barley | cytosol | 40.0 | 51.64 |
| GSMUA_Achr11P... | Banana | cytosol | 31.11 | 49.49 |
| Zm00001d043087_P001 | Maize | cytosol, extracellular, plastid | 32.7 | 48.58 |
| GSMUA_Achr7P21880_001 | Banana | cytosol | 30.79 | 48.02 |
| GSMUA_Achr4P02410_001 | Banana | cytosol, peroxisome, plastid | 31.43 | 47.6 |
| GSMUA_Achr10P... | Banana | plastid | 31.43 | 47.37 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 29.84 | 47.0 |
| Zm00001d012520_P001 | Maize | cytosol | 30.48 | 46.6 |
| Zm00001d010627_P001 | Maize | cytosol, plastid | 33.02 | 46.02 |
| Zm00001d038514_P001 | Maize | plastid | 33.02 | 46.02 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 29.84 | 43.52 |
| AT2G38640.1 | Thale cress | cytosol | 26.67 | 42.86 |
| CDY18377 | Canola | cytosol | 26.03 | 41.84 |
| CDX93313 | Canola | cytosol | 26.03 | 41.84 |
| CDY62435 | Canola | cytosol | 25.71 | 41.54 |
| CDY07714 | Canola | cytosol | 25.71 | 41.54 |
| CDY62436 | Canola | cytosol | 25.71 | 41.33 |
| CDY07715 | Canola | cytosol | 25.71 | 41.33 |
| Bra000080.1-P | Field mustard | cytosol | 25.4 | 41.03 |
| GSMUA_Achr11P... | Banana | cytosol | 30.48 | 40.85 |
| Bra000079.1-P | Field mustard | cytosol | 25.4 | 40.82 |
| Bra017111.1-P | Field mustard | cytosol | 25.4 | 40.82 |
| CDX91482 | Canola | cytosol | 25.08 | 40.51 |
| Bra005092.1-P | Field mustard | cytosol | 24.76 | 40.0 |
| CDY60759 | Canola | cytosol | 24.13 | 38.97 |
| KRH09578 | Soybean | cytosol | 25.08 | 37.98 |
| Zm00001d011925_P001 | Maize | cytosol | 19.68 | 30.39 |
| Zm00001d023305_P001 | Maize | plastid | 24.13 | 28.68 |
| Zm00001d044670_P001 | Maize | nucleus | 24.44 | 27.6 |
| Zm00001d011926_P001 | Maize | cytosol | 17.46 | 27.23 |
| Zm00001d005038_P001 | Maize | plastid | 21.9 | 27.06 |
| Zm00001d042239_P001 | Maize | plastid | 18.41 | 26.48 |
| Zm00001d043318_P001 | Maize | cytosol | 18.41 | 26.01 |
| Zm00001d052373_P001 | Maize | plastid | 20.95 | 25.1 |
| Zm00001d000310_P001 | Maize | cytosol | 19.37 | 25.0 |
| Zm00001d042237_P001 | Maize | mitochondrion | 16.51 | 23.21 |
| Zm00001d029119_P001 | Maize | mitochondrion | 18.1 | 23.08 |
| Zm00001d011924_P001 | Maize | plastid | 16.51 | 21.94 |
Protein Annotations
| EnsemblPlants:Zm00001d052372_P002 | EnsemblPlants:Zm00001d052372_T002 | EnsemblPlantsGene:Zm00001d052372 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 |
| InterPro:LOR | InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF5 | PFAM:PF04525 |
| ProteinID:AQK57068.1 | SEG:seg | SUPFAM:SSF54518 | UniParc:UPI000842435E | UniProt:A0A1D6QGP8 | MapMan:35.1 |
Description
Protein LURP-one-related 8
Coordinates
chr4:+:188398215..188400838
Molecular Weight (calculated)
33598.6 Da
IEP (calculated)
9.355
GRAVY (calculated)
-0.010
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKVHPNAAG SVVATAAAVG RAPAEADGEP STVLTVWRKS LLFNCDGFTV YDASGDLAFR VDCYAGSTRR WRRAGVVLMD ASGKPLLTVR RKTRLGLAER
101: WVIYDADADD GTTTTARATP LLSVRRRIGA CCKTLALAHS AAAGTDDAAA AAALSYVVEG SYGRRACAVR EERGGAVVAE VQRKEAVGDD VFRLVVAGSR
201: LGAPLSMALV IALDDMFRGG AGGGGWHCCE CDGRCIMPGG VNVSVESLEV CGGAIVEIRR HPWRQLLAVT WLQQLRKYKS FLIHIRQTAT THGLIRKSDS
301: DYMTKPCKMI RGGKG
101: WVIYDADADD GTTTTARATP LLSVRRRIGA CCKTLALAHS AAAGTDDAAA AAALSYVVEG SYGRRACAVR EERGGAVVAE VQRKEAVGDD VFRLVVAGSR
201: LGAPLSMALV IALDDMFRGG AGGGGWHCCE CDGRCIMPGG VNVSVESLEV CGGAIVEIRR HPWRQLLAVT WLQQLRKYKS FLIHIRQTAT THGLIRKSDS
301: DYMTKPCKMI RGGKG
001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
Arabidopsis Description
Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.