Factsheet for Bra000080.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62435	Canola	cytosol	98.97	98.97
CDY07714	Canola	cytosol	98.46	98.46
Bra000079.1-P	Field mustard	cytosol	97.95	97.45
Bra005092.1-P	Field mustard	cytosol	86.67	86.67
Bra017111.1-P	Field mustard	cytosol	86.67	86.22
AT2G38640.1	Thale cress	cytosol	84.1	83.67
VIT_08s0032g00760.t01	Wine grape	cytosol	53.85	52.5
GSMUA_Achr11P...	Banana	cytosol	50.26	49.49
GSMUA_Achr6P32380_001	Banana	cytosol	49.74	49.49
VIT_08s0056g00180.t01	Wine grape	cytosol	53.85	48.61
GSMUA_Achr7P21880_001	Banana	cytosol	47.69	46.04
KRH09578	Soybean	cytosol	48.72	45.67
GSMUA_Achr6P15880_001	Banana	plastid	47.18	45.32
GSMUA_Achr5P07550_001	Banana	cytosol	48.72	44.6
GSMUA_Achr3P09620_001	Banana	nucleus	48.72	44.6
GSMUA_Achr10P...	Banana	plastid	47.18	44.02
TraesCSU01G031000.1	Wheat	cytosol	46.67	43.33
GSMUA_Achr11P...	Banana	cytosol	51.79	42.98
GSMUA_Achr4P02410_001	Banana	cytosol, peroxisome, plastid	45.64	42.79
TraesCS4B01G396800.1	Wheat	plastid	46.15	42.45
TraesCS5A01G557700.1	Wheat	cytosol	44.62	42.23
Os05t0311500-01	Rice	cytosol	44.62	40.47
HORVU1Hr1G069180.1	Barley	cytosol, extracellular, plasma membrane	41.54	38.94
TraesCS1A01G303600.1	Wheat	extracellular, plasma membrane	41.03	38.84
TraesCS1B01G314000.1	Wheat	extracellular, plasma membrane	41.03	38.46
TraesCS1D01G303100.1	Wheat	extracellular, plasma membrane	41.03	38.28
TraesCS3A01G340700.1	Wheat	cytosol, extracellular, peroxisome	39.49	38.12
TraesCS3A01G340800.1	Wheat	cytosol, extracellular, peroxisome	40.0	37.86
TraesCS3B01G372400.1	Wheat	plastid	40.0	37.86
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	40.0	37.86
Os01t0817650-00	Rice	cytosol, extracellular, plastid	41.03	37.56
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	40.0	37.5
TraesCS3D01G334200.1	Wheat	cytosol	38.97	37.44
TraesCS3B01G372600.1	Wheat	cytosol, extracellular, peroxisome	38.97	37.07
TraesCS3B01G372300.1	Wheat	cytosol, peroxisome, plastid	38.46	36.95
TraesCS5B01G144000.1	Wheat	cytosol	43.08	36.84
EES01655	Sorghum	cytosol	39.49	36.84
HORVU4Hr1G047270.1	Barley	cytosol, extracellular, peroxisome	38.46	36.76
Os11t0120300-01	Rice	cytosol	41.54	36.65
EES09153	Sorghum	cytosol	43.59	36.48
EES16590	Sorghum	cytosol	42.05	36.44
Zm00001d044671_P001	Maize	cytosol	40.51	36.24
Os12t0120100-01	Rice	cytosol	41.03	36.04
Zm00001d052371_P001	Maize	cytosol	40.51	35.91
Bra008497.1-P	Field mustard	cytosol	38.46	35.71
EES19708	Sorghum	plastid	41.03	35.71
EES15617	Sorghum	cytosol	42.05	35.65
TraesCS5D01G147200.1	Wheat	cytosol	41.54	35.53
Bra025487.1-P	Field mustard	cytosol	40.51	35.43
Bra025486.1-P	Field mustard	cytosol	40.51	35.43
Os05t0484800-01	Rice	plastid	42.05	35.04
Zm00001d038514_P001	Maize	plastid	40.51	34.96
TraesCS5A01G145200.1	Wheat	cytosol	41.03	34.78
HORVU5Hr1G046200.1	Barley	cytosol	41.54	34.76
EES16588	Sorghum	cytosol, nucleus, plastid	42.56	34.58
Zm00001d043087_P001	Maize	cytosol, extracellular, plastid	37.44	34.43
Zm00001d010627_P001	Maize	cytosol, plastid	39.49	34.07
Zm00001d012520_P001	Maize	cytosol	35.9	33.98
GSMUA_Achr9P16860_001	Banana	cytosol	49.23	32.76
Zm00001d044474_P001	Maize	cytosol	40.0	32.5
HORVU3Hr1G080430.1	Barley	plastid	38.46	32.05
HORVU4Hr1G024080.1	Barley	cytosol	38.46	30.74
TraesCS4B01G123400.1	Wheat	cytosol	37.95	30.33
TraesCS4D01G121500.1	Wheat	cytosol	37.95	30.33
Bra035195.1-P	Field mustard	cytosol	32.31	30.0
TraesCS4A01G192000.1	Wheat	cytosol	37.44	29.92
EES09152	Sorghum	plastid	36.92	28.8
Bra001606.1-P	Field mustard	cytosol	31.28	28.64
Bra027206.1-P	Field mustard	cytosol	31.79	28.31
TraesCS3A01G340900.1	Wheat	mitochondrion	38.97	27.44
HORVU3Hr1G080440.1	Barley	plastid	38.97	26.57
Bra021544.1-P	Field mustard	cytosol	28.21	26.44
Bra001544.1-P	Field mustard	cytosol	28.21	26.44
Bra027804.1-P	Field mustard	cytosol	25.13	25.65
Zm00001d052372_P002	Maize	plastid	41.03	25.4
Bra039697.1-P	Field mustard	cytosol, extracellular, peroxisome	25.13	24.38
Bra039698.1-P	Field mustard	cytosol	25.13	24.38
Bra039696.1-P	Field mustard	cytosol	24.62	23.88
HORVU4Hr1G089220.1	Barley	plasma membrane	28.21	20.99

Protein Annotations

EnsemblPlants:Bra000080.1	EnsemblPlants:Bra000080.1-P	EnsemblPlantsGene:Bra000080	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF22	PFAM:PF04525
SUPFAM:SSF54518	UniParc:UPI0002540107	UniProt:M4C7A2	MapMan:35.1	:	:

Description

AT2G38640 (E=9e-095) | unknown protein

Coordinates

chrA03:-:9182914..9183619

Molecular Weight (calculated)

22069.9 Da

IEP (calculated)

9.913

GRAVY (calculated)

-0.241

Length

195 amino acids

Sequence
(BLAST)

001: MTKVHPKFPN TYEESLCDSK AAVVLTVWRK SLLFNCDGFT VYNSNGNLVF RVDNYMNSPK DNIVLMDASG LPLLSIRRKK LSMGDCWAVY DGETQRDPIF
101: TAKKNVSILT NKRSLAWVSV KKTILYEVEG SYGQKSCKIV DVRNKKKTAE IKRKDAMVGG GSFGKDVFKL IVESDMEPRV AMALTIILDQ MFRSY

Best Arabidopsis Sequence Match ( AT2G38640.1 )
(BLAST)

001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS

Arabidopsis Description

Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.