Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol, peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G340800.1 | Wheat | cytosol, extracellular, peroxisome | 92.65 | 91.75 |
| TraesCS3D01G334200.1 | Wheat | cytosol | 91.18 | 91.63 |
| TraesCS3B01G372300.1 | Wheat | cytosol, peroxisome, plastid | 90.69 | 91.13 |
| TraesCS3D01G334300.1 | Wheat | cytosol, extracellular, peroxisome | 92.16 | 90.38 |
| TraesCS3B01G372600.1 | Wheat | cytosol, extracellular, peroxisome | 90.69 | 90.24 |
| TraesCS3D01G334400.1 | Wheat | cytosol, extracellular, peroxisome | 89.71 | 88.83 |
| TraesCS3A01G340700.1 | Wheat | cytosol, extracellular, peroxisome | 87.75 | 88.61 |
| HORVU3Hr1G080430.1 | Barley | plastid | 100.0 | 87.18 |
| TraesCS3B01G372400.1 | Wheat | plastid | 87.75 | 86.89 |
| Os01t0817650-00 | Rice | cytosol, extracellular, plastid | 77.45 | 74.18 |
| EES01655 | Sorghum | cytosol | 74.02 | 72.25 |
| HORVU3Hr1G080440.1 | Barley | plastid | 94.61 | 67.48 |
| Zm00001d043087_P001 | Maize | cytosol, extracellular, plastid | 69.12 | 66.51 |
| TraesCS3A01G340900.1 | Wheat | mitochondrion | 90.2 | 66.43 |
| HORVU1Hr1G069180.1 | Barley | cytosol, extracellular, plasma membrane | 65.69 | 64.42 |
| Zm00001d012520_P001 | Maize | cytosol | 64.71 | 64.08 |
| GSMUA_Achr4P02410_001 | Banana | cytosol, peroxisome, plastid | 53.43 | 52.4 |
| GSMUA_Achr7P21880_001 | Banana | cytosol | 51.47 | 51.98 |
| GSMUA_Achr11P... | Banana | cytosol | 49.51 | 51.01 |
| GSMUA_Achr10P... | Banana | plastid | 49.02 | 47.85 |
| HORVU5Hr1G046200.1 | Barley | cytosol | 53.92 | 47.21 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 44.12 | 45.0 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 45.59 | 43.06 |
| GSMUA_Achr11P... | Banana | cytosol | 49.51 | 42.98 |
| HORVU4Hr1G024080.1 | Barley | cytosol | 49.02 | 40.98 |
| KRH09578 | Soybean | cytosol | 41.67 | 40.87 |
| CDY62436 | Canola | cytosol | 38.73 | 40.31 |
| AT2G38640.1 | Thale cress | cytosol | 38.73 | 40.31 |
| CDY07715 | Canola | cytosol | 38.24 | 39.8 |
| CDY62435 | Canola | cytosol | 37.75 | 39.49 |
| CDY07714 | Canola | cytosol | 37.75 | 39.49 |
| CDX93313 | Canola | cytosol | 37.75 | 39.29 |
| Bra000079.1-P | Field mustard | cytosol | 37.25 | 38.78 |
| Bra017111.1-P | Field mustard | cytosol | 37.25 | 38.78 |
| CDY18377 | Canola | cytosol | 37.25 | 38.78 |
| Bra000080.1-P | Field mustard | cytosol | 36.76 | 38.46 |
| CDX91482 | Canola | cytosol | 36.27 | 37.95 |
| Bra005092.1-P | Field mustard | cytosol | 35.78 | 37.44 |
| CDY60759 | Canola | cytosol | 35.29 | 36.92 |
| HORVU3Hr1G097510.1 | Barley | plastid | 18.63 | 32.2 |
| HORVU3Hr1G097260.1 | Barley | cytosol | 29.9 | 31.61 |
| HORVU3Hr1G097270.1 | Barley | plastid | 29.41 | 31.09 |
| HORVU3Hr1G097390.1 | Barley | plastid | 29.9 | 30.2 |
| HORVU3Hr1G097460.1 | Barley | mitochondrion, plastid | 29.9 | 28.77 |
| HORVU3Hr1G075150.1 | Barley | cytosol | 29.9 | 27.85 |
| HORVU2Hr1G019720.1 | Barley | plastid | 28.43 | 27.75 |
| HORVU3Hr1G097400.6 | Barley | cytosol, mitochondrion, plastid | 27.94 | 26.39 |
| HORVU3Hr1G097470.1 | Barley | plastid | 27.94 | 26.15 |
| HORVU5Hr1G046140.1 | Barley | mitochondrion | 30.39 | 25.51 |
| HORVU1Hr1G077760.1 | Barley | cytosol | 27.45 | 24.35 |
| HORVU6Hr1G081400.1 | Barley | mitochondrion | 27.94 | 22.53 |
| HORVU4Hr1G089220.1 | Barley | plasma membrane | 28.43 | 22.14 |
| HORVU5Hr1G046160.1 | Barley | mitochondrion | 31.86 | 17.11 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G047270.1 | EnsemblPlantsGene:HORVU4Hr1G047270 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF21 | PFAM:PF04525 | SUPFAM:SSF54518 |
| UniParc:UPI000B47F049 | UniProt:A0A287NXT0 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:378965723..378966337
Molecular Weight (calculated)
21928.3 Da
IEP (calculated)
9.417
GRAVY (calculated)
-0.006
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MARVHPNMAP APGAVDKAPA NPASAAEGPT TLTVWRKSLL FDCKGFTVFD AVGDLAYRVD SYASETGDEV VLMDAAGRPA FTVRRKRFSL QGEQWLVFAG
101: EETRRPVYAV RRSGRGKTMA YVTACAGAGA GPSYEVEGSY ARRSCVVYDG ERRAVAEIMP KAVVGTDVFR LVVQPGVGVS LAMAVVVALE QMFSRPSLLR
201: SWST
101: EETRRPVYAV RRSGRGKTMA YVTACAGAGA GPSYEVEGSY ARRSCVVYDG ERRAVAEIMP KAVVGTDVFR LVVQPGVGVS LAMAVVVALE QMFSRPSLLR
201: SWST
001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
Arabidopsis Description
Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.