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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18377 Canola cytosol 98.47 98.47
Bra017111.1-P Field mustard cytosol 96.43 96.43
AT2G38640.1 Thale cress cytosol 87.24 87.24
CDY60759 Canola cytosol 86.73 87.18
CDY62435 Canola cytosol 86.73 87.18
CDY07715 Canola cytosol 86.73 86.73
CDX91482 Canola cytosol 86.22 86.67
CDY07714 Canola cytosol 86.22 86.67
CDY62436 Canola cytosol 86.22 86.22
VIT_08s0032g00760.t01 Wine grape cytosol 56.63 55.5
VIT_08s0056g00180.t01 Wine grape cytosol 57.14 51.85
GSMUA_Achr6P32380_001 Banana cytosol 50.51 50.51
GSMUA_Achr11P... Banana cytosol 48.98 48.48
KRH09578 Soybean cytosol 50.51 47.6
GSMUA_Achr4P02410_001 Banana cytosol, peroxisome, plastid 47.96 45.19
GSMUA_Achr6P15880_001 Banana plastid 46.43 44.83
GSMUA_Achr5P07550_001 Banana cytosol 48.47 44.6
GSMUA_Achr3P09620_001 Banana nucleus 48.47 44.6
GSMUA_Achr7P21880_001 Banana cytosol 45.92 44.55
GSMUA_Achr10P... Banana plastid 46.94 44.02
TraesCSU01G031000.1 Wheat cytosol 44.39 41.43
GSMUA_Achr11P... Banana cytosol 49.49 41.28
TraesCS5A01G557700.1 Wheat cytosol 42.86 40.78
TraesCS4B01G396800.1 Wheat plastid 43.88 40.57
Os05t0311500-01 Rice cytosol 43.37 39.53
HORVU1Hr1G069180.1 Barley cytosol, extracellular, plasma membrane 40.82 38.46
TraesCS1A01G303600.1 Wheat extracellular, plasma membrane 40.31 38.35
TraesCS3A01G340700.1 Wheat cytosol, extracellular, peroxisome 39.29 38.12
Os01t0817650-00 Rice cytosol, extracellular, plastid 41.33 38.03
TraesCS1B01G314000.1 Wheat extracellular, plasma membrane 40.31 37.98
TraesCS3D01G334400.1 Wheat cytosol, extracellular, peroxisome 39.8 37.86
TraesCS3A01G340800.1 Wheat cytosol, extracellular, peroxisome 39.8 37.86
TraesCS1D01G303100.1 Wheat extracellular, plasma membrane 40.31 37.8
HORVU4Hr1G047270.1 Barley cytosol, extracellular, peroxisome 39.29 37.75
TraesCS5B01G144000.1 Wheat cytosol 43.88 37.72
CDY41119 Canola cytosol 40.31 37.62
CDY37567 Canola cytosol 40.31 37.62
TraesCS3B01G372600.1 Wheat cytosol, extracellular, peroxisome 39.29 37.56
TraesCS3D01G334300.1 Wheat cytosol, extracellular, peroxisome 39.8 37.5
TraesCS3B01G372300.1 Wheat cytosol, peroxisome, plastid 38.78 37.44
TraesCS3D01G334200.1 Wheat cytosol 38.78 37.44
EES09153 Sorghum cytosol 43.88 36.91
TraesCS3B01G372400.1 Wheat plastid 38.78 36.89
EES16590 Sorghum cytosol 42.35 36.89
EES01655 Sorghum cytosol 39.29 36.84
TraesCS5D01G147200.1 Wheat cytosol 42.35 36.4
Zm00001d052371_P001 Maize cytosol 40.82 36.36
Os05t0484800-01 Rice plastid 42.86 35.9
Zm00001d044671_P001 Maize cytosol 39.8 35.78
Os11t0120300-01 Rice cytosol 40.31 35.75
EES19708 Sorghum plastid 40.82 35.71
EES15617 Sorghum cytosol 41.84 35.65
TraesCS5A01G145200.1 Wheat cytosol 41.84 35.65
HORVU5Hr1G046200.1 Barley cytosol 42.35 35.62
Os12t0120100-01 Rice cytosol 39.8 35.14
Zm00001d038514_P001 Maize plastid 40.31 34.96
Zm00001d012520_P001 Maize cytosol 36.73 34.95
Zm00001d043087_P001 Maize cytosol, extracellular, plastid 37.24 34.43
Zm00001d010627_P001 Maize cytosol, plastid 39.29 34.07
EES16588 Sorghum cytosol, nucleus, plastid 41.33 33.75
Zm00001d044474_P001 Maize cytosol 40.31 32.92
HORVU3Hr1G080430.1 Barley plastid 39.29 32.91
GSMUA_Achr9P16860_001 Banana cytosol 48.98 32.76
CDX75845 Canola cytosol 34.18 31.46
CDY30113 Canola cytosol 34.69 31.05
CDY58464 Canola cytosol 33.67 30.99
HORVU4Hr1G024080.1 Barley cytosol 38.27 30.74
CDX87294 Canola cytosol 39.8 30.35
TraesCS4B01G123400.1 Wheat cytosol 37.76 30.33
TraesCS4D01G121500.1 Wheat cytosol 37.76 30.33
TraesCS4A01G192000.1 Wheat cytosol 37.24 29.92
EES09152 Sorghum plastid 37.24 29.2
TraesCS3A01G340900.1 Wheat mitochondrion 38.78 27.44
CDY45367 Canola cytosol 21.43 27.27
HORVU3Hr1G080440.1 Barley plastid 38.27 26.22
Zm00001d052372_P002 Maize plastid 41.84 26.03
CDY49893 Canola cytosol 24.49 25.13
CDY24068 Canola peroxisome 25.51 24.88
CDY71164 Canola cytosol, extracellular, peroxisome 23.98 24.48
CDY24067 Canola cytosol 25.0 24.38
CDY67855 Canola peroxisome 27.04 23.04
CDX75761 Canola cytosol 27.04 23.04
CDY33238 Canola cytosol, peroxisome, plastid 27.04 23.04
CDX82489 Canola cytosol 26.02 22.17
CDY24069 Canola cytosol 18.88 21.14
HORVU4Hr1G089220.1 Barley plasma membrane 27.55 20.61
CDY36610 Canola cytosol 14.8 19.59
CDY36612 Canola cytosol 13.27 19.12
Protein Annotations
EnsemblPlants:CDX93313EnsemblPlantsGene:GSBRNA2T00155285001Gene3D:3.20.90.20InterPro:IPR025659InterPro:IPR038595InterPro:LOR
InterPro:LOR_sfInterPro:Tubby-like_CPANTHER:PTHR31087PANTHER:PTHR31087:SF22PFAM:PF04525ProteinID:CDX93313
ProteinID:CDX93313.1SEG:segSUPFAM:SSF54518UniParc:UPI0004EE8C68MapMan:35.1:
Description
BnaC04g45830D
Coordinates
chrLK031875:+:884207..885095
Molecular Weight (calculated)
22323.3 Da
IEP (calculated)
9.769
GRAVY (calculated)
-0.215
Length
196 amino acids
Sequence
(BLAST)
001: MTKVHPKFPN TCEESLCDSK AAAVLTVWKK SLLFNCDGFT VYNSSGDLVF RVDNYMNSTK DKIVLMDASG LPLLSIRRKK LSLGDCWMVY DGETQRDPIF
101: TARKNVSIMT NRRSLAWVST KKTLLYEIEG SFGQRSCKIL DERMNKKKAA EIKRKEAMVG GVAFGKDVFK LIVESEMEPR VAMAFTIILD QMFRSY
Best Arabidopsis Sequence Match ( AT2G38640.1 )
(BLAST)
001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
Arabidopsis Description
Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.