Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027804.1-P | Field mustard | cytosol | 98.95 | 98.95 |
| CDY45367 | Canola | cytosol | 78.53 | 97.4 |
| AT1G63410.2 | Thale cress | cytosol | 90.58 | 80.47 |
| PGSC0003DMT400010898 | Potato | cytosol | 29.84 | 44.88 |
| Solyc12g056310.1.1 | Tomato | plastid | 46.07 | 44.67 |
| VIT_02s0025g03730.t01 | Wine grape | cytosol | 46.07 | 43.56 |
| PGSC0003DMT400014913 | Potato | plastid | 46.6 | 42.79 |
| VIT_02s0025g03740.t01 | Wine grape | plastid | 46.07 | 42.72 |
| KRH27952 | Soybean | cytosol | 42.93 | 42.49 |
| VIT_02s0025g03750.t01 | Wine grape | cytosol | 46.07 | 41.9 |
| Solyc08g007980.2.1 | Tomato | plastid | 45.03 | 41.35 |
| PGSC0003DMT400007876 | Potato | plastid | 43.46 | 41.29 |
| KRH77515 | Soybean | cytosol | 41.88 | 41.24 |
| KRH59852 | Soybean | cytosol | 41.36 | 40.31 |
| PGSC0003DMT400012847 | Potato | cytosol | 27.75 | 40.15 |
| Solyc08g080750.2.1 | Tomato | plastid | 42.41 | 40.1 |
| PGSC0003DMT400032165 | Potato | cytosol | 36.13 | 39.88 |
| Solyc08g080760.1.1 | Tomato | mitochondrion | 41.36 | 39.7 |
| Solyc08g080770.2.1 | Tomato | plastid | 41.36 | 37.26 |
| TraesCS2A01G113800.1 | Wheat | plastid | 40.31 | 36.84 |
| PGSC0003DMT400032166 | Potato | plastid | 40.84 | 36.79 |
| HORVU2Hr1G019720.1 | Barley | plastid | 39.79 | 36.36 |
| EER99890 | Sorghum | plastid | 38.22 | 35.96 |
| TraesCS2D01G114400.1 | Wheat | plastid | 40.31 | 35.65 |
| TraesCS2B01G132800.1 | Wheat | plastid | 39.27 | 35.05 |
| CDY24067 | Canola | cytosol | 36.13 | 34.33 |
| CDY24068 | Canola | peroxisome | 36.13 | 34.33 |
| CDY71164 | Canola | cytosol, extracellular, peroxisome | 34.03 | 33.85 |
| KRH41152 | Soybean | cytosol | 26.18 | 33.56 |
| CDY36612 | Canola | cytosol | 23.04 | 32.35 |
| Os07t0672600-00 | Rice | plastid | 38.22 | 31.88 |
| CDY24069 | Canola | cytosol | 28.8 | 31.43 |
| CDX75761 | Canola | cytosol | 37.17 | 30.87 |
| CDX82489 | Canola | cytosol | 37.17 | 30.87 |
| CDY33238 | Canola | cytosol, peroxisome, plastid | 36.65 | 30.43 |
| CDY67855 | Canola | peroxisome | 35.6 | 29.57 |
| CDY36610 | Canola | cytosol | 22.51 | 29.05 |
| CDY60759 | Canola | cytosol | 28.27 | 27.69 |
| Zm00001d029119_P001 | Maize | mitochondrion | 35.6 | 27.53 |
| CDX91482 | Canola | cytosol | 27.75 | 27.18 |
| TraesCS4A01G142700.1 | Wheat | mitochondrion, plastid | 34.03 | 26.75 |
| KXG39402 | Sorghum | mitochondrion | 36.13 | 26.74 |
| TraesCS4B01G155500.1 | Wheat | cytosol, mitochondrion | 34.03 | 26.0 |
| HORVU6Hr1G081400.1 | Barley | mitochondrion | 34.03 | 25.69 |
| TraesCS4D01G168500.1 | Wheat | mitochondrion | 34.03 | 25.19 |
| CDY62435 | Canola | cytosol | 25.65 | 25.13 |
| CDY07714 | Canola | cytosol | 25.65 | 25.13 |
| CDY07715 | Canola | cytosol | 25.65 | 25.0 |
| CDY62436 | Canola | cytosol | 25.65 | 25.0 |
| CDX93313 | Canola | cytosol | 25.13 | 24.49 |
| CDY18377 | Canola | cytosol | 25.13 | 24.49 |
| CDY58464 | Canola | cytosol | 27.23 | 24.41 |
| CDX75845 | Canola | cytosol | 27.23 | 24.41 |
| CDY41119 | Canola | cytosol | 26.18 | 23.81 |
| CDY37567 | Canola | cytosol | 26.18 | 23.81 |
| CDY30113 | Canola | cytosol | 27.23 | 23.74 |
| CDX87294 | Canola | cytosol | 25.13 | 18.68 |
| GSMUA_Achr3P24000_001 | Banana | nucleus | 38.74 | 8.96 |
Protein Annotations
| EnsemblPlants:CDY49893 | EnsemblPlantsGene:GSBRNA2T00094044001 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF25 | PFAM:PF04525 | ProteinID:CDY49893 |
| ProteinID:CDY49893.1 | SUPFAM:SSF54518 | UniParc:UPI0004EDEEA2 | UniProt:A0A078ILF5 | MapMan:35.1 | : |
Description
BnaC09g51330DBnaC09g51330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILF5]
Coordinates
chrLK032866:-:90735..92012
Molecular Weight (calculated)
21904.4 Da
IEP (calculated)
8.196
GRAVY (calculated)
-0.117
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MARVFPQAGV SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKSSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYGECG TLSSTEEVKP
101: FVKIKRSCIR DGDWEVRDET NEVFWILRFD PKFAFQIIDV HGNIIAKVKP KQSSNGVILG EDVLSLEVKP RIDHSLVVTL VTVYGLIKGI V
101: FVKIKRSCIR DGDWEVRDET NEVFWILRFD PKFAFQIIDV HGNIIAKVKP KQSSNGVILG EDVLSLEVKP RIDHSLVVTL VTVYGLIKGI V
001: MARVFPQAAI SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKCSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYRECG SFTSTEEVKP
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGV V
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGV V
Arabidopsis Description
Protein LURP-one-related 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH27]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.