Factsheet for TraesCS4D01G168500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	91.47	97.12
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	91.09	94.0
HORVU6Hr1G081400.1	Barley	mitochondrion	89.92	91.7
Zm00001d029119_P001	Maize	mitochondrion	50.39	52.63
TraesCS2D01G114400.1	Wheat	plastid	42.64	50.93
KXG39402	Sorghum	mitochondrion	50.0	50.0
VIT_02s0025g03730.t01	Wine grape	cytosol	34.5	44.06
VIT_02s0025g03750.t01	Wine grape	cytosol	35.66	43.81
VIT_02s0025g03740.t01	Wine grape	plastid	34.5	43.2
KRH47711	Soybean	peroxisome	32.95	43.15
KRH06275	Soybean	peroxisome	32.95	42.29
TraesCS3D01G442300.1	Wheat	plastid	30.62	41.15
PGSC0003DMT400032165	Potato	cytosol	27.52	41.04
PGSC0003DMT400007876	Potato	plastid	31.78	40.8
Bra021544.1-P	Field mustard	cytosol	32.56	40.38
Solyc08g080770.2.1	Tomato	plastid	32.95	40.09
Bra001544.1-P	Field mustard	cytosol	32.17	39.9
Solyc08g080760.1.1	Tomato	mitochondrion	30.62	39.7
Solyc08g080750.2.1	Tomato	plastid	31.01	39.6
KRH77515	Soybean	cytosol	29.46	39.18
TraesCS3D01G442600.1	Wheat	cytosol	30.23	39.0
PGSC0003DMT400014913	Potato	plastid	31.4	38.94
KRH27952	Soybean	cytosol	29.07	38.86
KRH59852	Soybean	cytosol	29.46	38.78
PGSC0003DMT400032166	Potato	plastid	31.78	38.68
TraesCS3D01G443000.1	Wheat	plastid	29.07	38.07
Solyc08g007980.2.1	Tomato	plastid	30.62	37.98
CDY33238	Canola	cytosol, peroxisome, plastid	33.33	37.39
TraesCS3D01G442200.1	Wheat	cytosol, plastid	28.29	37.24
TraesCS3D01G443100.1	Wheat	cytosol, plastid	28.29	36.87
Solyc12g056310.1.1	Tomato	plastid	27.91	36.55
AT3G14260.1	Thale cress	cytosol	32.56	36.52
CDY67855	Canola	peroxisome	32.56	36.52
TraesCS3D01G442800.1	Wheat	cytosol, plastid	28.29	36.32
CDX82489	Canola	cytosol	32.17	36.09
CDY24067	Canola	cytosol	27.52	35.32
Bra039698.1-P	Field mustard	cytosol	27.52	35.32
CDY24068	Canola	peroxisome	27.52	35.32
CDX75761	Canola	cytosol	31.4	35.22
PGSC0003DMT400010898	Potato	cytosol	17.05	34.65
Bra039697.1-P	Field mustard	cytosol, extracellular, peroxisome	26.74	34.33
Bra039696.1-P	Field mustard	cytosol	26.74	34.33
KRH41152	Soybean	cytosol	19.77	34.23
AT1G53870.3	Thale cress	cytosol, nucleus, peroxisome	28.68	34.1
CDY49893	Canola	cytosol	25.19	34.03
Bra027804.1-P	Field mustard	cytosol	25.19	34.03
CDY71164	Canola	cytosol, extracellular, peroxisome	25.19	33.85
TraesCS3D01G442400.1	Wheat	cytosol	28.68	33.79
PGSC0003DMT400012847	Potato	cytosol	17.05	33.33
CDY24069	Canola	cytosol	21.71	32.0
AT1G53875.1	Thale cress	cytosol, mitochondrion, nucleus, peroxisome	27.52	31.14
AT1G63410.2	Thale cress	cytosol	25.58	30.7
CDY45367	Canola	cytosol	18.22	30.52
CDY36610	Canola	cytosol	17.05	29.73
TraesCS3D01G334200.1	Wheat	cytosol	22.87	29.06
TraesCS3D01G442500.1	Wheat	cytosol	25.19	29.02
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	23.26	28.85
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	22.87	28.64
TraesCS1D01G303100.1	Wheat	extracellular, plasma membrane	22.87	28.23
CDY36612	Canola	cytosol	14.73	27.94
TraesCS3D01G442700.1	Wheat	cytosol	24.81	26.45
TraesCS5D01G147200.1	Wheat	cytosol	23.26	26.32
AT1G53890.3	Thale cress	cytosol	23.64	25.1
TraesCS4D01G121500.1	Wheat	cytosol	20.16	21.31
TraesCS5D01G147500.1	Wheat	nucleus	20.16	20.8
TraesCS5D01G147400.1	Wheat	plastid	19.77	19.39
TraesCS3D01G306600.1	Wheat	cytosol	15.89	18.72
TraesCS1D01G330600.1	Wheat	cytosol	15.5	16.95
GSMUA_Achr3P24000_001	Banana	nucleus	37.21	11.62

Protein Annotations

EnsemblPlants:TraesCS4D01G168500.1	EnsemblPlantsGene:TraesCS4D01G168500	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF51	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:293380579..293381355

Molecular Weight (calculated)

28317.7 Da

IEP (calculated)

8.379

GRAVY (calculated)

-0.418

Length

258 amino acids

Sequence
(BLAST)

001: MGGARWCLGA ELWTPKVKVH SSASCSSQKR LLLEDTPAAG APPAEEPAAA AGEGQVVKDQ DQGEGGEGEE HRSQQREVFT IWMKSLVLNG SGCTVFDSRG
101: RIVYRVDNYG SHRSVDVCLM DITGSVVLQV LKKFRRWEGY RCGGWEEPER GDAPRGRGRP WFTVVSNKWG RGPRCEFRSD GQAVRYKMDG GRRRQQAARA
201: SWIVDDATGL AVAEVKRKLT ATGVSLGEDV LTLVVEPNVD HSLIMGLLVV HGLINHSM

Best Arabidopsis Sequence Match ( AT1G53875.1 )
(BLAST)

001: MQIYSNNRTM RTKFSLNLIS PAKNMVKIHP DKAFPVDFSV GEGKTSPYLT TEKESFTIWM RSLVFHSKGC TVFDSKGNLI YRVDNYNSKS CSEVYLMDLY
101: GKILFTLRQK KLGLFKSWKG YNSTGTRFQL RKNFKILPKG SSSSYKVVMG SRIVDGDHQS CYKIVKRKSV FTIEDGSGRL LAEVKKKQSN IKSLDLGKDV
201: LTMMVEPQVD HSLIMGIVIA YSLLKCKL

Arabidopsis Description

LURP-one-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AWJ7]
SUBAcon: [mitochondrion,peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.