Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- peroxisome 2
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G53890.3 | Thale cress | cytosol | 87.1 | 77.78 |
| AT1G53875.1 | Thale cress | cytosol, mitochondrion, nucleus, peroxisome | 80.18 | 76.32 |
| CDY24068 | Canola | peroxisome | 65.9 | 71.14 |
| CDY71164 | Canola | cytosol, extracellular, peroxisome | 62.21 | 70.31 |
| Bra039697.1-P | Field mustard | cytosol, extracellular, peroxisome | 64.98 | 70.15 |
| CDY24067 | Canola | cytosol | 64.06 | 69.15 |
| Bra039696.1-P | Field mustard | cytosol | 64.06 | 69.15 |
| Bra039698.1-P | Field mustard | cytosol | 64.06 | 69.15 |
| CDY24069 | Canola | cytosol | 54.84 | 68.0 |
| CDY36610 | Canola | cytosol | 45.16 | 66.22 |
| AT3G14260.1 | Thale cress | cytosol | 59.91 | 56.52 |
| CDY36612 | Canola | cytosol | 32.26 | 51.47 |
| KRH47711 | Soybean | peroxisome | 40.55 | 44.67 |
| KRH06275 | Soybean | peroxisome | 41.01 | 44.28 |
| Os07t0672600-00 | Rice | plastid | 38.71 | 36.68 |
| TraesCS2A01G113800.1 | Wheat | plastid | 35.02 | 36.36 |
| HORVU2Hr1G019720.1 | Barley | plastid | 34.56 | 35.89 |
| TraesCS2D01G114400.1 | Wheat | plastid | 35.02 | 35.19 |
| TraesCS2B01G132800.1 | Wheat | plastid | 34.56 | 35.05 |
| AT1G63410.2 | Thale cress | cytosol | 32.72 | 33.02 |
| EER99890 | Sorghum | plastid | 29.95 | 32.02 |
| TraesCS4A01G142700.1 | Wheat | mitochondrion, plastid | 34.1 | 30.45 |
| TraesCS4B01G155500.1 | Wheat | cytosol, mitochondrion | 34.1 | 29.6 |
| HORVU6Hr1G081400.1 | Barley | mitochondrion | 34.1 | 29.25 |
| Zm00001d029119_P001 | Maize | mitochondrion | 33.18 | 29.15 |
| TraesCS4D01G168500.1 | Wheat | mitochondrion | 34.1 | 28.68 |
| KXG39402 | Sorghum | mitochondrion | 33.18 | 27.91 |
| AT2G38640.1 | Thale cress | cytosol | 23.5 | 26.02 |
| AT1G80120.1 | Thale cress | cytosol | 23.5 | 24.29 |
| AT3G15810.1 | Thale cress | cytosol | 22.58 | 22.27 |
| AT5G41590.1 | Thale cress | cytosol | 22.58 | 22.17 |
| GSMUA_Achr3P24000_001 | Banana | nucleus | 35.48 | 9.32 |
Protein Annotations
| Gene3D:3.20.90.20 | MapMan:35.1 | EntrezGene:841824 | EntrezGene:841827 | ProteinID:AAF02862.1 | ProteinID:AAF02866.1 |
| ProteinID:AEE33012.1 | ProteinID:AEE33013.1 | ProteinID:AEE33017.1 | ProteinID:AEE33018.1 | EMBL:AK175272 | EMBL:AK175430 |
| EMBL:AK176711 | ProteinID:ANM57833.1 | ProteinID:ANM57834.1 | ProteinID:ANM58534.1 | ProteinID:ANM58535.1 | ArrayExpress:AT1G53870 |
| EnsemblPlantsGene:AT1G53870 | RefSeq:AT1G53870 | TAIR:AT1G53870 | RefSeq:AT1G53870-TAIR-G | EnsemblPlants:AT1G53870.3 | EMBL:AY084488 |
| EMBL:BT024598 | EMBL:BT028947 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR | InterPro:LOR_sf |
| RefSeq:NP_001031184.1 | RefSeq:NP_001319216.1 | RefSeq:NP_001319217.1 | RefSeq:NP_001320314.1 | RefSeq:NP_001320961.1 | RefSeq:NP_564642.1 |
| RefSeq:NP_564645.1 | RefSeq:NP_974021.1 | PFAM:PF04525 | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF30 | UniProt:Q67XV7 |
| UniProt:Q8LG32 | SUPFAM:SSF54518 | InterPro:Tubby-like_C | UniParc:UPI000016312C | SEG:seg | : |
Description
Protein LURP-one-related 3 [Source:UniProtKB/Swiss-Prot;Acc:Q67XV7]
Coordinates
chr1:+:20112144..20113960
Molecular Weight (calculated)
24905.5 Da
IEP (calculated)
9.793
GRAVY (calculated)
-0.155
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MQIYNPISPV KTMVKIYPHL AFPVDMDVVQ DKILPYLTTE QERFTIWMKS LVFNSKGCTV FDSKGNLIYR VDNYDSKSWS NEVYFMDLNG KILFTLRQKK
101: LGFFKSWEGY NSTGTRFRLR KIFKILPRES SSSYKVVMGS RIVDGDQQSC YKIVNRGSVF AIKDGSGRLM AEVKNKLSDI SGLDLGDDVL TMMVEPQLDH
201: SLIMGIVIAY KLTKCKL
101: LGFFKSWEGY NSTGTRFRLR KIFKILPRES SSSYKVVMGS RIVDGDQQSC YKIVNRGSVF AIKDGSGRLM AEVKNKLSDI SGLDLGDDVL TMMVEPQLDH
201: SLIMGIVIAY KLTKCKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.