Factsheet for GSMUA_Achr3P24000_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_02s0025g03750.t01	Wine grape	cytosol	12.47	49.05
VIT_02s0025g03730.t01	Wine grape	cytosol	11.99	49.01
TraesCS2A01G113800.1	Wheat	plastid	11.99	47.37
HORVU2Hr1G019720.1	Barley	plastid	11.86	46.89
TraesCS2B01G132800.1	Wheat	plastid	12.11	46.73
VIT_02s0025g03740.t01	Wine grape	plastid	11.62	46.6
TraesCS2D01G114400.1	Wheat	plastid	12.11	46.3
PGSC0003DMT400032165	Potato	cytosol	9.44	45.09
PGSC0003DMT400032166	Potato	plastid	11.38	44.34
Solyc08g080770.2.1	Tomato	plastid	11.38	44.34
PGSC0003DMT400007876	Potato	plastid	10.53	43.28
Solyc08g080760.1.1	Tomato	mitochondrion	10.41	43.22
KRH59852	Soybean	cytosol	10.17	42.86
EER99890	Sorghum	plastid	10.53	42.86
KRH06275	Soybean	peroxisome	10.41	42.79
KRH47711	Soybean	peroxisome	10.17	42.64
Solyc08g080750.2.1	Tomato	plastid	10.41	42.57
KRH27952	Soybean	cytosol	9.93	42.49
KRH77515	Soybean	cytosol	9.81	41.75
KRH41152	Soybean	cytosol	7.51	41.61
Os07t0672600-00	Rice	plastid	11.26	40.61
CDY36612	Canola	cytosol	6.66	40.44
PGSC0003DMT400014913	Potato	plastid	10.17	40.38
Solyc08g007980.2.1	Tomato	plastid	10.05	39.9
AT1G63410.2	Thale cress	cytosol	10.29	39.53
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	11.86	39.2
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	11.5	39.09
Bra021544.1-P	Field mustard	cytosol	9.81	38.94
Bra027804.1-P	Field mustard	cytosol	8.96	38.74
CDY49893	Canola	cytosol	8.96	38.74
HORVU6Hr1G081400.1	Barley	mitochondrion	11.86	38.74
Solyc12g056310.1.1	Tomato	plastid	9.2	38.58
CDY24067	Canola	cytosol	9.32	38.31
Bra039698.1-P	Field mustard	cytosol	9.32	38.31
CDY71164	Canola	cytosol, extracellular, peroxisome	8.84	38.02
Bra039696.1-P	Field mustard	cytosol	9.2	37.81
CDY45367	Canola	cytosol	7.02	37.66
Bra001544.1-P	Field mustard	cytosol	9.44	37.5
Bra039697.1-P	Field mustard	cytosol, extracellular, peroxisome	9.08	37.31
CDY24068	Canola	peroxisome	9.08	37.31
TraesCS4D01G168500.1	Wheat	mitochondrion	11.62	37.21
Zm00001d029119_P001	Maize	mitochondrion	10.9	36.44
AT1G53870.3	Thale cress	cytosol, nucleus, peroxisome	9.32	35.48
CDY67855	Canola	peroxisome	9.81	35.22
CDY33238	Canola	cytosol, peroxisome, plastid	9.81	35.22
PGSC0003DMT400012847	Potato	cytosol	5.57	34.85
KXG39402	Sorghum	mitochondrion	10.77	34.5
GSMUA_Achr5P07550_001	Banana	cytosol	8.84	34.27
AT3G14260.1	Thale cress	cytosol	9.44	33.91
CDX82489	Canola	cytosol	9.44	33.91
PGSC0003DMT400010898	Potato	cytosol	5.21	33.86
GSMUA_Achr3P09620_001	Banana	nucleus	8.72	33.8
CDY24069	Canola	cytosol	7.14	33.71
GSMUA_Achr6P32380_001	Banana	cytosol	7.99	33.67
CDX75761	Canola	cytosol	9.32	33.48
AT1G53875.1	Thale cress	cytosol, mitochondrion, nucleus, peroxisome	8.96	32.46
CDY36610	Canola	cytosol	5.69	31.76
GSMUA_Achr11P...	Banana	cytosol	7.51	31.31
GSMUA_Achr10P...	Banana	plastid	7.87	31.1
GSMUA_Achr7P21840_001	Banana	cytosol	7.51	30.1
GSMUA_Achr11P...	Banana	cytosol	8.47	29.79
GSMUA_Achr7P21880_001	Banana	cytosol	7.26	29.7
GSMUA_Achr6P15880_001	Banana	plastid	7.26	29.56
AT1G53890.3	Thale cress	cytosol	8.6	29.22
GSMUA_Achr11P...	Banana	cytosol	7.14	28.78
GSMUA_Achr4P02410_001	Banana	cytosol, peroxisome, plastid	7.14	28.37
GSMUA_Achr3P13680_001	Banana	cytosol	4.36	27.48
GSMUA_Achr9P16860_001	Banana	cytosol	9.56	26.96
GSMUA_Achr4P02400_001	Banana	cytosol	6.17	21.25

Protein Annotations

EnsemblPlants:GSMUA_Achr3P24000_001	EnsemblPlants:GSMUA_Achr3T24000_001	EnsemblPlantsGene:GSMUA_Achr3G24000_001	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF25	PFAM:PF04525
SEG:seg	SUPFAM:SSF54518	UniParc:UPI000294D1A1	UniProt:M0SHB6	MapMan:35.1	:

Description

Putative Protein LURP-one-related 11 [Source:GMGC_GENE;Acc:GSMUA_Achr3G24000_001]

Coordinates

chr3:-:24678525..24682599

Molecular Weight (calculated)

89360.5 Da

IEP (calculated)

11.068

GRAVY (calculated)

-0.383

Length

826 amino acids

Sequence
(BLAST)

001: MEHKVHPEPL LPSASPSSSS SSSSSSSSSS ASFSTTARRE VYTLWMKSLV LNGNGCTVYD STGRLAYRVD NYDCKCSDEV YLMDHGGRTL CKILRRKLRM
101: FGRWEGYRCH DSAREEKRPW FRVKKGDGIL RRSKSREIEV MVGCSKGKAS CYSTEGLGNN LAFKIKDLAG RTVAEVGRKR TEGGVVLGED VLMLVVEPNV
201: DRLLIMGLMV VCGLIKQNIR LRSPASSWPR PRTATSPMST SPSATPASAA PTSPSRLGGA PCTPTPPTSP ATGWAPTSAS SLTPRSSTST PTAVLRDHSQ
301: ELLPAGAPAR AGRQQQPLRR TFSDGGGRSP FVEVRRPPVQ RLRGRPPAGA LRQGARRHLR ERQPLQLAHP RQLRQLHGLR RGFGQQQALR MHSQQHRENG
401: SHAQRACSLE QRARRLLADR DWASGQRDGV RRELELLNGH ATDELRGAEQ GLAVGLVAQR PRRSCPQEAL RAAEPRQLHV FLQLFHGRGR QLRAVVEVEP
501: ARWIVAERNV GLLRHSESPV SRVHSPPPQN SKLTPPPPQH SESPVTRVHS PPPSKLVRPP PQPIHSSPPL LHLLLQQLSI LHLLHSAHHH RHLHLHHQCI
601: LLRYHLPQPR LQSSLLLRFI FSSATTCLNP APILLCSSSS SGCPFSTSST QLTTIATGIF SSATTRLTPA SNLLSSTANF ISSSSCPFAT TSSSLITATG
701: ILTSTSGAFP SSTYTLTATA SGLAPASNLP SSTANFISYS SSCAFSTSSP FAAPSSPLIT STSSTGAVSS VTYTLTPTSD LLPSITNPIS SSSSHFSPPP
801: PPDFDILPPV GGLSYASPPS PIYKGY

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.