Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039697.1-P | Field mustard | cytosol, extracellular, peroxisome | 98.51 | 98.51 |
| CDY24069 | Canola | cytosol | 83.58 | 96.0 |
| CDY71164 | Canola | cytosol, extracellular, peroxisome | 90.05 | 94.27 |
| CDY24067 | Canola | cytosol | 91.04 | 91.04 |
| CDY36610 | Canola | cytosol | 66.67 | 90.54 |
| CDY36612 | Canola | cytosol | 49.25 | 72.79 |
| AT1G53875.1 | Thale cress | cytosol, mitochondrion, nucleus, peroxisome | 76.12 | 67.11 |
| AT1G53870.3 | Thale cress | cytosol, nucleus, peroxisome | 71.14 | 65.9 |
| CDY33238 | Canola | cytosol, peroxisome, plastid | 59.2 | 51.74 |
| CDX75761 | Canola | cytosol | 58.21 | 50.87 |
| CDX82489 | Canola | cytosol | 57.71 | 50.43 |
| CDY67855 | Canola | peroxisome | 57.21 | 50.0 |
| AT1G53890.3 | Thale cress | cytosol | 60.2 | 49.79 |
| KRH47711 | Soybean | peroxisome | 41.29 | 42.13 |
| KRH06275 | Soybean | peroxisome | 41.79 | 41.79 |
| TraesCS2A01G113800.1 | Wheat | plastid | 38.31 | 36.84 |
| HORVU2Hr1G019720.1 | Barley | plastid | 38.31 | 36.84 |
| TraesCS2B01G132800.1 | Wheat | plastid | 38.81 | 36.45 |
| CDY49893 | Canola | cytosol | 34.33 | 36.13 |
| TraesCS2D01G114400.1 | Wheat | plastid | 38.31 | 35.65 |
| EER99890 | Sorghum | plastid | 33.83 | 33.5 |
| Os07t0672600-00 | Rice | plastid | 37.81 | 33.19 |
| CDY45367 | Canola | cytosol | 24.88 | 32.47 |
| TraesCS4A01G142700.1 | Wheat | mitochondrion, plastid | 35.32 | 29.22 |
| HORVU6Hr1G081400.1 | Barley | mitochondrion | 35.82 | 28.46 |
| TraesCS4B01G155500.1 | Wheat | cytosol, mitochondrion | 35.32 | 28.4 |
| CDY60759 | Canola | cytosol | 26.87 | 27.69 |
| Zm00001d029119_P001 | Maize | mitochondrion | 33.83 | 27.53 |
| TraesCS4D01G168500.1 | Wheat | mitochondrion | 35.32 | 27.52 |
| CDX91482 | Canola | cytosol | 26.37 | 27.18 |
| KXG39402 | Sorghum | mitochondrion | 33.83 | 26.36 |
| CDY18377 | Canola | cytosol | 25.37 | 26.02 |
| CDY07714 | Canola | cytosol | 24.88 | 25.64 |
| CDY62435 | Canola | cytosol | 24.88 | 25.64 |
| CDX93313 | Canola | cytosol | 24.88 | 25.51 |
| CDY07715 | Canola | cytosol | 24.88 | 25.51 |
| CDY62436 | Canola | cytosol | 24.88 | 25.51 |
| CDY37567 | Canola | cytosol | 24.88 | 23.81 |
| CDY41119 | Canola | cytosol | 24.88 | 23.81 |
| CDX75845 | Canola | cytosol | 23.88 | 22.54 |
| CDY58464 | Canola | cytosol | 23.88 | 22.54 |
| CDY30113 | Canola | cytosol | 23.38 | 21.46 |
| CDX87294 | Canola | cytosol | 23.38 | 18.29 |
| GSMUA_Achr3P24000_001 | Banana | nucleus | 37.31 | 9.08 |
Protein Annotations
| EnsemblPlants:CDY24068 | EnsemblPlantsGene:GSBRNA2T00024608001 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF30 | PFAM:PF04525 | ProteinID:CDY24068 |
| ProteinID:CDY24068.1 | SEG:seg | SUPFAM:SSF54518 | UniParc:UPI0004EED23C | UniProt:A0A078GHI1 | MapMan:35.1 |
Description
BnaA06g00660DBnaA06g00660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GHI1]
Coordinates
chrLK032153:-:253345..253950
Molecular Weight (calculated)
22624.1 Da
IEP (calculated)
6.898
GRAVY (calculated)
-0.224
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MVQIHPVQAV PVDSGIGEVK SSPYVTTEQE SFTIWMRSLV YHSKGCTVYD SKGNLIYRVD NYDSKSCGEV YLMDLYGEVL FEFQQKFGLF KSCEGCNSNG
101: TRFRLRKNFK ISPRGSSSSY KVVMESSKDD QQSCYKILDH GSVFIIEDGS GRLMAEIKKK QSNVNGLDFG EDVLTMVVEP QVDHSFIMGI VIAYGLLKCK
201: L
101: TRFRLRKNFK ISPRGSSSSY KVVMESSKDD QQSCYKILDH GSVFIIEDGS GRLMAEIKKK QSNVNGLDFG EDVLTMVVEP QVDHSFIMGI VIAYGLLKCK
201: L
001: MQIYSNNRTM RTKFSLNLIS PAKNMVKIHP DKAFPVDFSV GEGKTSPYLT TEKESFTIWM RSLVFHSKGC TVFDSKGNLI YRVDNYNSKS CSEVYLMDLY
101: GKILFTLRQK KLGLFKSWKG YNSTGTRFQL RKNFKILPKG SSSSYKVVMG SRIVDGDHQS CYKIVKRKSV FTIEDGSGRL LAEVKKKQSN IKSLDLGKDV
201: LTMMVEPQVD HSLIMGIVIA YSLLKCKL
101: GKILFTLRQK KLGLFKSWKG YNSTGTRFQL RKNFKILPKG SSSSYKVVMG SRIVDGDHQS CYKIVKRKSV FTIEDGSGRL LAEVKKKQSN IKSLDLGKDV
201: LTMMVEPQVD HSLIMGIVIA YSLLKCKL
Arabidopsis Description
LURP-one-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AWJ7]
SUBAcon: [mitochondrion,peroxisome,nucleus,cytosol]
SUBAcon: [mitochondrion,peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.