Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001606.1-P | Field mustard | cytosol | 98.12 | 98.12 |
| CDX75845 | Canola | cytosol | 98.12 | 98.12 |
| AT3G15810.1 | Thale cress | cytosol | 92.49 | 89.55 |
| CDY30113 | Canola | cytosol | 89.67 | 87.21 |
| CDY41119 | Canola | cytosol | 61.5 | 62.38 |
| CDY37567 | Canola | cytosol | 61.5 | 62.38 |
| Solyc03g116710.2.1 | Tomato | cytosol | 58.22 | 58.77 |
| PGSC0003DMT400001705 | Potato | cytosol | 58.22 | 58.77 |
| CDX87294 | Canola | cytosol | 61.97 | 51.36 |
| GSMUA_Achr3P13680_001 | Banana | cytosol | 30.05 | 48.85 |
| HORVU3Hr1G075150.1 | Barley | cytosol | 47.42 | 46.12 |
| TraesCS3B01G340800.1 | Wheat | cytosol | 47.42 | 45.91 |
| TraesCS3A01G296300.1 | Wheat | cytosol | 47.42 | 45.91 |
| TraesCS3D01G306600.1 | Wheat | cytosol | 46.95 | 45.66 |
| Zm00001d043318_P001 | Maize | cytosol | 46.48 | 44.39 |
| EES03690 | Sorghum | cytosol | 46.01 | 43.95 |
| Os01t0771000-01 | Rice | cytosol | 46.48 | 43.61 |
| HORVU1Hr1G077760.1 | Barley | cytosol | 44.13 | 40.87 |
| TraesCS1B01G341900.1 | Wheat | cytosol | 43.19 | 39.15 |
| TraesCS1D01G330600.1 | Wheat | cytosol | 43.19 | 38.98 |
| Zm00001d000310_P001 | Maize | cytosol | 44.13 | 38.52 |
| Os05t0510100-01 | Rice | cytosol | 42.72 | 38.4 |
| EES18481 | Sorghum | cytosol | 43.19 | 38.17 |
| TraesCS1A01G328100.1 | Wheat | cytosol | 43.19 | 37.86 |
| CDX91482 | Canola | cytosol | 30.99 | 33.85 |
| CDX93313 | Canola | cytosol | 30.99 | 33.67 |
| CDY18377 | Canola | cytosol | 30.99 | 33.67 |
| CDY60759 | Canola | cytosol | 30.05 | 32.82 |
| CDY62436 | Canola | cytosol | 29.11 | 31.63 |
| CDY62435 | Canola | cytosol | 28.64 | 31.28 |
| CDY07715 | Canola | cytosol | 28.64 | 31.12 |
| CDY07714 | Canola | cytosol | 28.17 | 30.77 |
| CDY49893 | Canola | cytosol | 24.41 | 27.23 |
| CDY45367 | Canola | cytosol | 17.37 | 24.03 |
| CDY24068 | Canola | peroxisome | 22.54 | 23.88 |
| CDY24067 | Canola | cytosol | 22.07 | 23.38 |
| CDY71164 | Canola | cytosol, extracellular, peroxisome | 20.66 | 22.92 |
| CDY33238 | Canola | cytosol, peroxisome, plastid | 24.41 | 22.61 |
| CDX75761 | Canola | cytosol | 23.94 | 22.17 |
| CDY67855 | Canola | peroxisome | 23.94 | 22.17 |
| CDX82489 | Canola | cytosol | 23.47 | 21.74 |
| CDY24069 | Canola | cytosol | 17.37 | 21.14 |
| CDY36610 | Canola | cytosol | 13.15 | 18.92 |
| CDY36612 | Canola | cytosol | 11.27 | 17.65 |
Protein Annotations
| EnsemblPlants:CDY58464 | EnsemblPlantsGene:GSBRNA2T00023635001 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF2 | PFAM:PF04525 | ProteinID:CDY58464 |
| ProteinID:CDY58464.1 | SUPFAM:SSF54518 | UniParc:UPI0004EE219A | UniProt:A0A078J5W5 | MapMan:35.1 | : |
Description
BnaA03g57510DBnaA03g57510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5W5]
Coordinates
chrLK033670:-:26959..28783
Molecular Weight (calculated)
24092.5 Da
IEP (calculated)
4.377
GRAVY (calculated)
-0.339
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MELVEEMGEK RVVVDKAYLY EEDKPLTVCK TSLFYTGDGF AAYDCHGDII FRVDSYGPDT RDNDEFVLMD VAGKCLLTVK RKRPTLHQRW EGFLGERSDG
101: QKPIFSVRRS SIIGRCTMDV ELYDGTGEEY TIDGDFSQRS CLIYDTNKRT VAEIKRKVDA STSVMLGRDV FTLEIKPGFD GAFVMGLVLV LDQINGDDPV
201: EIGDEQVHPF VED
101: QKPIFSVRRS SIIGRCTMDV ELYDGTGEEY TIDGDFSQRS CLIYDTNKRT VAEIKRKVDA STSVMLGRDV FTLEIKPGFD GAFVMGLVLV LDQINGDDPV
201: EIGDEQVHPF VED
001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED
Arabidopsis Description
Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.