CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80120.1	EES01631	AT2G41090.1	17360592
AT1G80120.1	EES09201	AT2G41090.1	17360592
AT1G80120.1	EES16322	AT2G41090.1	17360592
AT1G80120.1	OQU78227	AT2G41090.1	17360592
AT1G80120.1	EES01631	AT5G21274.1	17360592
AT1G80120.1	EES09201	AT5G21274.1	17360592
AT1G80120.1	EES16322	AT5G21274.1	17360592
AT1G80120.1	OQU78227	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043318_P001	Maize	cytosol	91.93	91.93
TraesCS3D01G306600.1	Wheat	cytosol	80.72	82.19
TraesCS3A01G296300.1	Wheat	cytosol	80.72	81.82
TraesCS3B01G340800.1	Wheat	cytosol	80.27	81.36
HORVU3Hr1G075150.1	Barley	cytosol	79.82	81.28
Os01t0771000-01	Rice	cytosol	82.51	81.06
EES18481	Sorghum	cytosol	63.68	58.92
GSMUA_Achr3P13680_001	Banana	cytosol	32.29	54.96
Solyc03g116710.2.1	Tomato	cytosol	45.74	48.34
KRH09722	Soybean	cytosol	47.09	47.95
VIT_09s0002g06920.t01	Wine grape	cytosol	44.39	47.83
AT1G80120.1	Thale cress	cytosol	44.84	47.62
PGSC0003DMT400001705	Potato	cytosol	44.84	47.39
KRH44464	Soybean	cytosol	46.19	47.03
KRH23583	Soybean	cytosol	46.19	46.82
CDY37567	Canola	cytosol	43.5	46.19
CDY41119	Canola	cytosol	43.5	46.19
Bra008497.1-P	Field mustard	cytosol	43.5	46.19
KRH47444	Soybean	cytosol	45.29	46.12
CDY58464	Canola	cytosol	43.95	46.01
Bra001606.1-P	Field mustard	cytosol	43.5	45.54
CDX75845	Canola	cytosol	43.05	45.07
CDY30113	Canola	cytosol	43.95	44.75
Bra027206.1-P	Field mustard	cytosol	43.5	44.29
AT3G15810.1	Thale cress	cytosol	43.05	43.64
CDX87294	Canola	cytosol	41.7	36.19
Bra035195.1-P	Field mustard	cytosol	33.63	35.71
EES16590	Sorghum	cytosol	31.39	31.11
EES15617	Sorghum	cytosol	31.84	30.87
EES01655	Sorghum	cytosol	28.25	30.14
EES09153	Sorghum	cytosol	29.6	28.33
EES16588	Sorghum	cytosol, nucleus, plastid	30.04	27.92
EES09156	Sorghum	plastid	30.04	26.38
EES19708	Sorghum	plastid	26.46	26.34
EES09152	Sorghum	plastid	28.25	25.2
EES04157	Sorghum	plastid	22.42	24.88
EES09154	Sorghum	plastid	31.84	24.83
EES02017	Sorghum	cytosol, mitochondrion, plastid	23.77	24.09
EER99890	Sorghum	plastid	21.52	23.65
EES15616	Sorghum	plastid	31.84	22.76
EES04156	Sorghum	plastid	19.73	20.47
EES04155	Sorghum	cytosol	19.28	19.72
KXG39402	Sorghum	mitochondrion	20.63	17.83

Protein Annotations

EnsemblPlants:EES03690	EnsemblPlantsGene:SORBI_3003G310500	EntrezGene:8079270	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF2	PFAM:PF04525
ProteinID:EES03690	ProteinID:EES03690.1	RefSeq:XP_002458570.1	SEG:seg	SUPFAM:SSF54518	UniParc:UPI0001A85617
UniProt:C5XL06	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:63871788..63872459

Molecular Weight (calculated)

23400.1 Da

IEP (calculated)

8.877

GRAVY (calculated)

-0.014

Length

223 amino acids

Sequence
(BLAST)

001: MPIVGAEYCD PEERVLTVRK TSHFSPGDGF AAYDARTGGL AFRADTYGRG HGGGAASAGE LALLGPSGEP LLTVRRRRPS LHQRWEGFLG ARADGQKALF
101: SARRPSILGG AAAGAVIELL PPPRAAGAAA PELLRVDGSF PRRCCRVVAA PRAEGEKAKV VAEIRRKVDE GARVVMGRDV FVLRVSPGFD AAFAMGIVLV
201: LDQIAGDDAS IDAGADVIDA KIW

Best Arabidopsis Sequence Match ( AT3G15810.1 )
(BLAST)

001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED

Arabidopsis Description

Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.