Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
- plastid 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011926_P001 | Maize | cytosol | 75.69 | 81.68 |
| TraesCS3B01G486300.1 | Wheat | plastid | 58.26 | 64.8 |
| TraesCS3A01G450000.1 | Wheat | cytosol | 58.26 | 64.8 |
| HORVU3Hr1G097270.1 | Barley | plastid | 57.34 | 64.77 |
| TraesCS3A01G449500.1 | Wheat | cytosol | 50.0 | 64.5 |
| TraesCS3B01G486900.1 | Wheat | cytosol, plastid | 57.34 | 63.78 |
| TraesCS3A01G449900.1 | Wheat | plastid | 57.34 | 63.78 |
| TraesCS3A01G449700.1 | Wheat | plastid | 56.42 | 63.73 |
| HORVU3Hr1G097260.1 | Barley | cytosol | 56.42 | 63.73 |
| TraesCS3D01G442300.1 | Wheat | plastid | 55.96 | 63.54 |
| TraesCS3D01G442200.1 | Wheat | cytosol, plastid | 56.42 | 62.76 |
| EES04157 | Sorghum | plastid | 57.8 | 62.69 |
| TraesCS3B01G486200.1 | Wheat | plastid | 56.88 | 62.31 |
| TraesCS3D01G442600.1 | Wheat | cytosol | 56.88 | 62.0 |
| TraesCS3D01G442800.1 | Wheat | cytosol, plastid | 56.88 | 61.69 |
| TraesCS3D01G443100.1 | Wheat | cytosol, plastid | 55.96 | 61.62 |
| TraesCS3A01G450200.1 | Wheat | plastid | 55.96 | 61.62 |
| EES04156 | Sorghum | plastid | 60.09 | 60.93 |
| TraesCS3B01G486600.1 | Wheat | cytosol | 55.05 | 60.91 |
| TraesCS3D01G443000.1 | Wheat | plastid | 55.05 | 60.91 |
| HORVU3Hr1G097510.1 | Barley | plastid | 32.57 | 60.17 |
| TraesCS3A01G449800.1 | Wheat | cytosol | 54.13 | 59.9 |
| TraesCS3A01G449600.1 | Wheat | mitochondrion | 34.86 | 59.84 |
| TraesCS3B01G487000.1 | Wheat | plastid | 53.67 | 59.69 |
| TraesCS3A01G450100.1 | Wheat | cytosol | 53.67 | 59.69 |
| HORVU3Hr1G097390.1 | Barley | plastid | 55.05 | 59.41 |
| HORVU3Hr1G097400.6 | Barley | cytosol, mitochondrion, plastid | 58.72 | 59.26 |
| HORVU3Hr1G097460.1 | Barley | mitochondrion, plastid | 56.88 | 58.49 |
| TraesCS3B01G487200.1 | Wheat | cytosol | 52.29 | 58.16 |
| Os01t0931600-00 | Rice | cytosol | 54.59 | 55.09 |
| TraesCS3D01G442400.1 | Wheat | cytosol | 55.05 | 54.79 |
| TraesCS3B01G486800.1 | Wheat | plastid | 56.42 | 54.42 |
| HORVU3Hr1G097470.1 | Barley | plastid | 52.75 | 52.75 |
| TraesCS3B01G487100.1 | Wheat | plastid | 49.08 | 51.2 |
| TraesCS3D01G442500.1 | Wheat | cytosol | 49.54 | 48.21 |
| EES02017 | Sorghum | cytosol, mitochondrion, plastid | 44.5 | 44.09 |
| EER99890 | Sorghum | plastid | 34.4 | 36.95 |
| EES01655 | Sorghum | cytosol | 27.06 | 28.23 |
| KXG39402 | Sorghum | mitochondrion | 32.11 | 27.13 |
| EES15617 | Sorghum | cytosol | 27.52 | 26.09 |
| EES16590 | Sorghum | cytosol | 25.23 | 24.44 |
| EES09153 | Sorghum | cytosol | 25.23 | 23.61 |
| EES16588 | Sorghum | cytosol, nucleus, plastid | 25.23 | 22.92 |
| EES19708 | Sorghum | plastid | 23.39 | 22.77 |
| EES09154 | Sorghum | plastid | 28.44 | 21.68 |
| EES09156 | Sorghum | plastid | 25.23 | 21.65 |
| EES09152 | Sorghum | plastid | 23.85 | 20.8 |
| EES03690 | Sorghum | cytosol | 19.72 | 19.28 |
| EES15616 | Sorghum | plastid | 25.69 | 17.95 |
| EES18481 | Sorghum | cytosol | 19.72 | 17.84 |
Protein Annotations
| EnsemblPlants:EES04155 | EnsemblPlantsGene:SORBI_3003G414700 | EntrezGene:8059406 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 |
| InterPro:LOR | InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF12 | PFAM:PF04525 |
| ProteinID:EES04155 | ProteinID:EES04155.1 | RefSeq:XP_002459035.1 | SEG:seg | SUPFAM:SSF54518 | UniParc:UPI0001A85634 |
| UniProt:C5XH24 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:-:72134560..72135796
Molecular Weight (calculated)
23824.3 Da
IEP (calculated)
8.139
GRAVY (calculated)
-0.233
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKIKPWPAA GLLSPAGSSS DDNDECCQSS QGAVEQQQQA AAAEYTVWMK SLVFNGNGCT VYGADGRVAY RVDNYGCRGG REVFFMDRAG SNLIRIQRKS
101: FFMFRRWEAC RCFDDGEGEE ARPWFRVHKT WKQDDGCAAV VTMHGSGRTY RIEGCARKSD YRILSADDGA IMAAVGRKRT SAGVVLGEDV LALTVGSATD
201: HLLALGLVVV CGLMSRRL
101: FFMFRRWEAC RCFDDGEGEE ARPWFRVHKT WKQDDGCAAV VTMHGSGRTY RIEGCARKSD YRILSADDGA IMAAVGRKRT SAGVVLGEDV LALTVGSATD
201: HLLALGLVVV CGLMSRRL
001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL
Arabidopsis Description
Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.