Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G449700.1 | Wheat | plastid | 100.0 | 65.8 |
| TraesCS3A01G449500.1 | Wheat | cytosol | 82.68 | 62.13 |
| TraesCS3B01G486300.1 | Wheat | plastid | 89.76 | 58.16 |
| TraesCS3D01G442200.1 | Wheat | cytosol, plastid | 85.83 | 55.61 |
| TraesCS3A01G450200.1 | Wheat | plastid | 84.25 | 54.04 |
| HORVU3Hr1G097270.1 | Barley | plastid | 81.1 | 53.37 |
| TraesCS3A01G449900.1 | Wheat | plastid | 81.89 | 53.06 |
| HORVU3Hr1G097260.1 | Barley | cytosol | 80.31 | 52.85 |
| TraesCS3A01G450000.1 | Wheat | cytosol | 81.1 | 52.55 |
| TraesCS3A01G449800.1 | Wheat | cytosol | 79.53 | 51.27 |
| TraesCS3A01G450100.1 | Wheat | cytosol | 73.23 | 47.45 |
| EES04157 | Sorghum | plastid | 61.42 | 38.81 |
| Zm00001d011926_P001 | Maize | cytosol | 57.48 | 36.14 |
| EES04155 | Sorghum | cytosol | 59.84 | 34.86 |
| Zm00001d011925_P001 | Maize | cytosol | 55.91 | 34.8 |
| Zm00001d042239_P001 | Maize | plastid | 59.84 | 34.7 |
| Os01t0931600-00 | Rice | cytosol | 55.12 | 32.41 |
| EES04156 | Sorghum | plastid | 54.33 | 32.09 |
| TraesCS2A01G113800.1 | Wheat | plastid | 37.01 | 22.49 |
| TraesCS4A01G142700.1 | Wheat | mitochondrion, plastid | 38.58 | 20.16 |
| TraesCS3A01G340800.1 | Wheat | cytosol, extracellular, peroxisome | 29.92 | 18.45 |
| TraesCS3A01G340700.1 | Wheat | cytosol, extracellular, peroxisome | 29.13 | 18.32 |
| TraesCS1A01G303600.1 | Wheat | extracellular, plasma membrane | 29.13 | 17.96 |
| TraesCS3A01G296300.1 | Wheat | cytosol | 27.56 | 15.91 |
| TraesCS5A01G557700.1 | Wheat | cytosol | 24.41 | 15.05 |
| TraesCS1A01G328100.1 | Wheat | cytosol | 27.56 | 14.4 |
| TraesCS5A01G144800.1 | Wheat | nucleus | 26.77 | 14.23 |
| TraesCS5A01G145200.1 | Wheat | cytosol | 25.2 | 13.91 |
| TraesCS3A01G340900.1 | Wheat | mitochondrion | 29.92 | 13.72 |
| TraesCS4A01G192000.1 | Wheat | cytosol | 22.05 | 11.48 |
| TraesCS5A01G145000.1 | Wheat | nucleus, plastid | 27.56 | 9.8 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G449600.1 | EnsemblPlantsGene:TraesCS3A01G449600 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF12 | PFAM:PF04525 | SUPFAM:SSF54518 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:688907122..688907505
Molecular Weight (calculated)
13949.1 Da
IEP (calculated)
10.231
GRAVY (calculated)
-0.169
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRGGNALIR IRRKGFGMFR RWEVCRYEQG EEATPWFTVR RAKKGEAAVA MHGGARTCYR MDGCPARKTE YKVRGVDGAA VAEVAPKQTA AGVVLGEDVL
101: TLTVAPEMDH LLALGMVVVR GLINRSL
101: TLTVAPEMDH LLALGMVVVR GLINRSL
001: MARVFPQAAI SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKCSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYRECG SFTSTEEVKP
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGV V
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGV V
Arabidopsis Description
Protein LURP-one-related 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH27]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.