Factsheet for TraesCS3A01G450200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G449500.1	Wheat	cytosol	74.24	86.98
TraesCS3B01G486200.1	Wheat	plastid	85.86	85.43
TraesCS3D01G443100.1	Wheat	cytosol, plastid	84.34	84.34
TraesCS3A01G449600.1	Wheat	mitochondrion	54.04	84.25
HORVU3Hr1G097260.1	Barley	cytosol	81.31	83.42
TraesCS3A01G449900.1	Wheat	plastid	82.32	83.16
HORVU3Hr1G097270.1	Barley	plastid	80.3	82.38
TraesCS3A01G450100.1	Wheat	cytosol	80.81	81.63
TraesCS3A01G449700.1	Wheat	plastid	79.29	81.35
TraesCS3A01G450000.1	Wheat	cytosol	80.3	81.12
TraesCS3A01G449800.1	Wheat	cytosol	79.29	79.7
EES04157	Sorghum	plastid	63.13	62.19
Zm00001d011926_P001	Maize	cytosol	58.59	57.43
Zm00001d011925_P001	Maize	cytosol	58.08	56.37
Zm00001d042239_P001	Maize	plastid	62.12	56.16
EES04155	Sorghum	cytosol	61.62	55.96
Os01t0931600-00	Rice	cytosol	58.08	53.24
EES04156	Sorghum	plastid	57.58	53.02
TraesCS2A01G113800.1	Wheat	plastid	38.89	36.84
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	35.86	29.22
TraesCS3A01G340800.1	Wheat	cytosol, extracellular, peroxisome	27.78	26.7
TraesCS3A01G340700.1	Wheat	cytosol, extracellular, peroxisome	26.77	26.24
TraesCS1A01G303600.1	Wheat	extracellular, plasma membrane	26.77	25.73
TraesCS5A01G145200.1	Wheat	cytosol	27.78	23.91
TraesCS3A01G296300.1	Wheat	cytosol	25.76	23.18
TraesCS5A01G144800.1	Wheat	nucleus	27.78	23.01
TraesCS5A01G557700.1	Wheat	cytosol	23.74	22.82
TraesCS4A01G192000.1	Wheat	cytosol	26.77	21.72
TraesCS1A01G328100.1	Wheat	cytosol	26.26	21.4
TraesCS3A01G340900.1	Wheat	mitochondrion	27.78	19.86
TraesCS5A01G145000.1	Wheat	nucleus, plastid	28.79	15.97

Protein Annotations

EnsemblPlants:TraesCS3A01G450200.1	EnsemblPlantsGene:TraesCS3A01G450200	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:689002845..689003441

Molecular Weight (calculated)

21636.1 Da

IEP (calculated)

9.593

GRAVY (calculated)

-0.205

Length

198 amino acids

Sequence
(BLAST)

001: MAKIQPLHSS PCSTSSSGVQ PGRQAYTVWM KSLVFNGNGC AVYGPDGAVA FRVDNYGCRG GHEALFMDRQ GNALIRIRRK GFWTFRRWEV CRCTHDGSEE
101: EEATPWFSVR RAKKGGAVVA MHGGARTCYR MDGCSGARKP EYRVRGVDGS VVAEVARKQT SAGVVLGEDV LTLTVAQEMD HLLVLGLVVV RGLINRSL

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.