Factsheet for TraesCS3D01G443100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, extracellular, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G097260.1	Barley	cytosol	82.83	84.97
TraesCS3A01G450200.1	Wheat	plastid	84.34	84.34
TraesCS3B01G486200.1	Wheat	plastid	83.84	83.42
TraesCS3D01G442300.1	Wheat	plastid	80.81	83.33
TraesCS3D01G443000.1	Wheat	plastid	82.32	82.74
HORVU3Hr1G097270.1	Barley	plastid	79.8	81.87
TraesCS3D01G442200.1	Wheat	cytosol, plastid	80.81	81.63
TraesCS3D01G442800.1	Wheat	cytosol, plastid	80.81	79.6
TraesCS3D01G442600.1	Wheat	cytosol	80.3	79.5
TraesCS3D01G442400.1	Wheat	cytosol	79.29	71.69
TraesCS3D01G442500.1	Wheat	cytosol	70.2	62.05
EES04157	Sorghum	plastid	61.11	60.2
Zm00001d011926_P001	Maize	cytosol	59.09	57.92
Zm00001d011925_P001	Maize	cytosol	58.59	56.86
Zm00001d042239_P001	Maize	plastid	62.63	56.62
EES04155	Sorghum	cytosol	61.62	55.96
Os01t0931600-00	Rice	cytosol	60.61	55.56
EES04156	Sorghum	plastid	59.6	54.88
TraesCS3D01G442700.1	Wheat	cytosol	48.99	40.08
TraesCS2D01G114400.1	Wheat	plastid	42.42	38.89
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	29.8	28.64
TraesCS3D01G334200.1	Wheat	cytosol	29.29	28.57
TraesCS4D01G168500.1	Wheat	mitochondrion	36.87	28.29
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	29.29	27.88
TraesCS1D01G303100.1	Wheat	extracellular, plasma membrane	27.27	25.84
TraesCS5D01G147200.1	Wheat	cytosol	28.79	25.0
TraesCS3D01G306600.1	Wheat	cytosol	26.26	23.74
TraesCS4D01G121500.1	Wheat	cytosol	27.78	22.54
TraesCS5D01G147500.1	Wheat	nucleus	28.28	22.4
TraesCS5D01G147400.1	Wheat	plastid	29.29	22.05
TraesCS1D01G330600.1	Wheat	cytosol	26.26	22.03

Protein Annotations

EnsemblPlants:TraesCS3D01G443100.1	EnsemblPlantsGene:TraesCS3D01G443100	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:+:552733540..552734136

Molecular Weight (calculated)

21288.4 Da

IEP (calculated)

7.988

GRAVY (calculated)

-0.085

Length

198 amino acids

Sequence
(BLAST)

001: MAKIQPLSSS PCSSSSSDDH QQGRHAYTVW MKSLVFNGNG CAVYGPDGAV AFRVDNYGCR GGREVLFMDR QGNALFTIIR KGFWAFSRWE VCRCAHDGSE
101: EEEATPWFGV RRAEKGGAAV AMNGGAGTCY RIDGCCARKP EYRVRGVDGA VVAEVARKQT AAGVVLGEDV LTLTVGPEAD HLLVLGLVVV RGLITRSL

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.