Factsheet for TraesCS3D01G442500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G442800.1	Wheat	cytosol, plastid	74.11	82.59
TraesCS3D01G442600.1	Wheat	cytosol	70.54	79.0
HORVU3Hr1G097510.1	Barley	plastid	40.62	77.12
TraesCS3D01G442300.1	Wheat	plastid	63.84	74.48
TraesCS3D01G443000.1	Wheat	plastid	64.29	73.1
TraesCS3D01G443100.1	Wheat	cytosol, plastid	62.05	70.2
TraesCS3D01G442200.1	Wheat	cytosol, plastid	61.16	69.9
TraesCS3D01G442400.1	Wheat	cytosol	65.62	67.12
EES04157	Sorghum	plastid	50.45	56.22
EES04156	Sorghum	plastid	51.34	53.49
Zm00001d011925_P001	Maize	cytosol	47.32	51.96
Zm00001d011926_P001	Maize	cytosol	46.43	51.49
Zm00001d042239_P001	Maize	plastid	50.0	51.14
EES04155	Sorghum	cytosol	48.21	49.54
Os01t0931600-00	Rice	cytosol	47.32	49.07
TraesCS3D01G442700.1	Wheat	cytosol	37.5	34.71
TraesCS2D01G114400.1	Wheat	plastid	30.8	31.94
TraesCS3D01G334200.1	Wheat	cytosol	26.34	29.06
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	26.79	28.85
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	26.34	28.64
TraesCS1D01G303100.1	Wheat	extracellular, plasma membrane	25.45	27.27
TraesCS5D01G147200.1	Wheat	cytosol	27.23	26.75
TraesCS4D01G168500.1	Wheat	mitochondrion	29.02	25.19
TraesCS4D01G121500.1	Wheat	cytosol	25.89	23.77
TraesCS3D01G306600.1	Wheat	cytosol	20.54	21.0
TraesCS1D01G330600.1	Wheat	cytosol	21.88	20.76
TraesCS5D01G147500.1	Wheat	nucleus	22.77	20.4
TraesCS5D01G147400.1	Wheat	plastid	23.21	19.77

Protein Annotations

EnsemblPlants:TraesCS3D01G442500.1	EnsemblPlantsGene:TraesCS3D01G442500	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:552570467..552571141

Molecular Weight (calculated)

24518.0 Da

IEP (calculated)

9.097

GRAVY (calculated)

-0.246

Length

224 amino acids

Sequence
(BLAST)

001: MAKIQPLAAA ASPSSSDDQR SQQAYTVWMK SLVFNGNGCT VYGPDGAIVF RVDYYGCRGG REVFFMDRQG NALIRIRRKG FGLFRRWDVC RCAHNGGQEE
101: EATPWFSVRR SEKGGAAVTM HGGAGACYTI DGCSAGKSEY RVRGVDGTVV AEVARKQTPA GVVLGEDVLT LTVAPRRITS SSWVWSSCVA SSTAPCDGWL
201: KWQSSSYLRH PFHITRADLV QLYT

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.