Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- extracellular 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G340800.1 | Wheat | cytosol, extracellular, peroxisome | 95.63 | 95.63 |
| TraesCS3D01G334300.1 | Wheat | cytosol, extracellular, peroxisome | 95.63 | 94.71 |
| TraesCS3D01G334200.1 | Wheat | cytosol | 91.75 | 93.1 |
| TraesCS3B01G372400.1 | Wheat | plastid | 92.72 | 92.72 |
| HORVU4Hr1G047270.1 | Barley | cytosol, extracellular, peroxisome | 88.83 | 89.71 |
| HORVU3Hr1G080430.1 | Barley | plastid | 88.83 | 78.21 |
| Os01t0817650-00 | Rice | cytosol, extracellular, plastid | 78.16 | 75.59 |
| EES01655 | Sorghum | cytosol | 70.39 | 69.38 |
| TraesCS1D01G303100.1 | Wheat | extracellular, plasma membrane | 67.96 | 66.99 |
| HORVU3Hr1G080440.1 | Barley | plastid | 92.23 | 66.43 |
| Zm00001d043087_P001 | Maize | cytosol, extracellular, plastid | 66.5 | 64.62 |
| Zm00001d012520_P001 | Maize | cytosol | 63.59 | 63.59 |
| GSMUA_Achr11P... | Banana | cytosol | 50.49 | 52.53 |
| GSMUA_Achr7P21880_001 | Banana | cytosol | 50.97 | 51.98 |
| GSMUA_Achr4P02410_001 | Banana | cytosol, peroxisome, plastid | 51.94 | 51.44 |
| TraesCS5D01G147200.1 | Wheat | cytosol | 56.8 | 51.32 |
| GSMUA_Achr10P... | Banana | plastid | 51.46 | 50.72 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 46.12 | 47.5 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 47.57 | 45.37 |
| GSMUA_Achr11P... | Banana | cytosol | 50.97 | 44.68 |
| TraesCS4D01G121500.1 | Wheat | cytosol | 51.94 | 43.85 |
| KRH09578 | Soybean | cytosol | 43.69 | 43.27 |
| AT2G38640.1 | Thale cress | cytosol | 39.81 | 41.84 |
| CDY62436 | Canola | cytosol | 39.32 | 41.33 |
| CDY62435 | Canola | cytosol | 38.84 | 41.03 |
| CDY07714 | Canola | cytosol | 38.84 | 41.03 |
| CDY07715 | Canola | cytosol | 38.84 | 40.82 |
| CDX91482 | Canola | cytosol | 38.35 | 40.51 |
| Bra000079.1-P | Field mustard | cytosol | 38.35 | 40.31 |
| Bra017111.1-P | Field mustard | cytosol | 38.35 | 40.31 |
| CDY18377 | Canola | cytosol | 38.35 | 40.31 |
| Bra000080.1-P | Field mustard | cytosol | 37.86 | 40.0 |
| Bra005092.1-P | Field mustard | cytosol | 37.86 | 40.0 |
| CDX93313 | Canola | cytosol | 37.86 | 39.8 |
| CDY60759 | Canola | cytosol | 37.38 | 39.49 |
| TraesCS3D01G442300.1 | Wheat | plastid | 31.07 | 33.33 |
| TraesCS3D01G442200.1 | Wheat | cytosol, plastid | 30.58 | 32.14 |
| TraesCS3D01G443000.1 | Wheat | plastid | 29.61 | 30.96 |
| TraesCS3D01G442600.1 | Wheat | cytosol | 29.61 | 30.5 |
| TraesCS3D01G442800.1 | Wheat | cytosol, plastid | 29.61 | 30.35 |
| TraesCS3D01G443100.1 | Wheat | cytosol, plastid | 28.64 | 29.8 |
| TraesCS3D01G306600.1 | Wheat | cytosol | 30.58 | 28.77 |
| TraesCS3D01G442400.1 | Wheat | cytosol | 28.64 | 26.94 |
| TraesCS2D01G114400.1 | Wheat | plastid | 28.16 | 26.85 |
| TraesCS3D01G442500.1 | Wheat | cytosol | 28.64 | 26.34 |
| TraesCS5D01G147500.1 | Wheat | nucleus | 30.58 | 25.2 |
| TraesCS5D01G147400.1 | Wheat | plastid | 31.55 | 24.71 |
| TraesCS1D01G330600.1 | Wheat | cytosol | 26.21 | 22.88 |
| TraesCS4D01G168500.1 | Wheat | mitochondrion | 28.64 | 22.87 |
| TraesCS3D01G442700.1 | Wheat | cytosol | 24.76 | 21.07 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G334400.1 | EnsemblPlantsGene:TraesCS3D01G334400 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF21 | PFAM:PF04525 | SEG:seg |
| SUPFAM:SSF54518 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr3D:-:446191076..446191696
Molecular Weight (calculated)
22319.7 Da
IEP (calculated)
8.617
GRAVY (calculated)
-0.116
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKVHPNMVP APGAVDEAPC APSSSTEEPT TLTVWRKSLL FDCKGFTVFD AKGNLAYRVD SYASESGDEV VLMDAAGRPA FTVRRKRFSL QGEQWLVFSG
101: EETRRPVYTV RRSGRGKTLA HVAACGGAGA GPSYEVEGSY ARRSCVVYDG ERRAVAEIRP KEVVGTDVFR LVVQPGVGVS LAMAVVVALE QMFARPSLLR
201: SWSTID
101: EETRRPVYTV RRSGRGKTLA HVAACGGAGA GPSYEVEGSY ARRSCVVYDG ERRAVAEIRP KEVVGTDVFR LVVQPGVGVS LAMAVVVALE QMFARPSLLR
201: SWSTID
001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
Arabidopsis Description
Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.