Factsheet for TraesCS3D01G442400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 2
plastid 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G442300.1	Wheat	plastid	75.34	85.94
TraesCS3B01G486200.1	Wheat	plastid	77.63	85.43
HORVU3Hr1G097260.1	Barley	cytosol	74.43	84.46
TraesCS3D01G442800.1	Wheat	cytosol, plastid	76.71	83.58
TraesCS3D01G442600.1	Wheat	cytosol	75.8	83.0
TraesCS3D01G443000.1	Wheat	plastid	73.97	82.23
HORVU3Hr1G097270.1	Barley	plastid	70.78	80.31
TraesCS3D01G443100.1	Wheat	cytosol, plastid	71.69	79.29
TraesCS3D01G442200.1	Wheat	cytosol, plastid	70.78	79.08
EES04157	Sorghum	plastid	60.73	66.17
TraesCS3D01G442500.1	Wheat	cytosol	67.12	65.62
Zm00001d011925_P001	Maize	cytosol	56.62	60.78
Zm00001d042239_P001	Maize	plastid	59.36	59.36
Zm00001d011926_P001	Maize	cytosol	53.88	58.42
EES04156	Sorghum	plastid	56.16	57.21
Os01t0931600-00	Rice	cytosol	56.16	56.94
EES04155	Sorghum	cytosol	54.79	55.05
TraesCS3D01G442700.1	Wheat	cytosol	46.12	41.74
TraesCS2D01G114400.1	Wheat	plastid	36.53	37.04
TraesCS4D01G168500.1	Wheat	mitochondrion	33.79	28.68
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	26.94	28.64
TraesCS3D01G334200.1	Wheat	cytosol	26.48	28.57
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	26.48	27.88
TraesCS5D01G147200.1	Wheat	cytosol	28.77	27.63
TraesCS1D01G303100.1	Wheat	extracellular, plasma membrane	24.2	25.36
TraesCS5D01G147400.1	Wheat	plastid	27.85	23.19
TraesCS4D01G121500.1	Wheat	cytosol	25.11	22.54
TraesCS5D01G147500.1	Wheat	nucleus	25.57	22.4
TraesCS3D01G306600.1	Wheat	cytosol	22.37	22.37
TraesCS1D01G330600.1	Wheat	cytosol	22.37	20.76

Protein Annotations

EnsemblPlants:TraesCS3D01G442400.1	EnsemblPlantsGene:TraesCS3D01G442400	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:552529936..552530595

Molecular Weight (calculated)

23926.7 Da

IEP (calculated)

8.581

GRAVY (calculated)

-0.245

Length

219 amino acids

Sequence
(BLAST)

001: MSFSSQQQQS REIFFELSPM AKIQPLPAAA ASPSPCSGDH HQSPQAYKVW MKSLVFNGNG CAVYGPDGAV AFRVDNYGCR GGREVFFMDR QGNALVRIRR
101: KGFGMFKRWE VCRCAHNGHQ DEEATPWFSV RRAEKGRAAV AMHGGSGTCY RIDGCSGEHK PEYRVRGVDG SAVAEVARKQ TAAGVVLGED VLTLTMAPEV
201: DHLLVLGLVV VCGLMNRSM

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.