Factsheet for TraesCS2D01G114400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G113800.1	Wheat	plastid	94.91	98.09
HORVU2Hr1G019720.1	Barley	plastid	94.91	98.09
TraesCS2B01G132800.1	Wheat	plastid	96.76	97.66
Os07t0672600-00	Rice	plastid	66.67	62.88
EER99890	Sorghum	plastid	56.94	60.59
VIT_02s0025g03730.t01	Wine grape	cytosol	43.06	46.04
VIT_02s0025g03740.t01	Wine grape	plastid	43.06	45.15
VIT_02s0025g03750.t01	Wine grape	cytosol	43.06	44.29
TraesCS4D01G168500.1	Wheat	mitochondrion	50.93	42.64
TraesCS3D01G443100.1	Wheat	cytosol, plastid	38.89	42.42
PGSC0003DMT400032165	Potato	cytosol	33.33	41.62
KRH27952	Soybean	cytosol	37.04	41.45
KRH77515	Soybean	cytosol	37.04	41.24
KRH47711	Soybean	peroxisome	37.5	41.12
TraesCS3D01G443000.1	Wheat	plastid	37.5	41.12
TraesCS3D01G442600.1	Wheat	cytosol	37.96	41.0
PGSC0003DMT400007876	Potato	plastid	37.96	40.8
Solyc08g080770.2.1	Tomato	plastid	39.81	40.57
Bra027804.1-P	Field mustard	cytosol	35.65	40.31
CDY49893	Canola	cytosol	35.65	40.31
KRH59852	Soybean	cytosol	36.57	40.31
TraesCS3D01G442200.1	Wheat	cytosol, plastid	36.57	40.31
KRH06275	Soybean	peroxisome	37.5	40.3
Solyc08g080760.1.1	Tomato	mitochondrion	37.04	40.2
Solyc12g056310.1.1	Tomato	plastid	36.57	40.1
PGSC0003DMT400032166	Potato	plastid	39.35	40.09
TraesCS3D01G442300.1	Wheat	plastid	35.19	39.58
CDY24067	Canola	cytosol	36.57	39.3
Bra039698.1-P	Field mustard	cytosol	36.57	39.3
Solyc08g080750.2.1	Tomato	plastid	36.57	39.11
PGSC0003DMT400010898	Potato	cytosol	22.69	38.58
Bra001544.1-P	Field mustard	cytosol	37.04	38.46
PGSC0003DMT400014913	Potato	plastid	37.04	38.46
CDY24068	Canola	peroxisome	35.65	38.31
TraesCS3D01G442800.1	Wheat	cytosol, plastid	35.65	38.31
CDY45367	Canola	cytosol	26.85	37.66
Bra039696.1-P	Field mustard	cytosol	34.72	37.31
Bra039697.1-P	Field mustard	cytosol, extracellular, peroxisome	34.72	37.31
Solyc08g007980.2.1	Tomato	plastid	35.65	37.02
CDY71164	Canola	cytosol, extracellular, peroxisome	32.87	36.98
TraesCS3D01G442400.1	Wheat	cytosol	37.04	36.53
AT1G63410.2	Thale cress	cytosol	35.65	35.81
Bra021544.1-P	Field mustard	cytosol	34.26	35.58
KRH41152	Soybean	cytosol	24.54	35.57
AT1G53870.3	Thale cress	cytosol, nucleus, peroxisome	35.19	35.02
CDX82489	Canola	cytosol	37.04	34.78
CDX75761	Canola	cytosol	36.57	34.35
CDY24069	Canola	cytosol	27.78	34.29
CDY33238	Canola	cytosol, peroxisome, plastid	35.65	33.48
AT3G14260.1	Thale cress	cytosol	35.19	33.04
AT1G53875.1	Thale cress	cytosol, mitochondrion, nucleus, peroxisome	34.72	32.89
PGSC0003DMT400012847	Potato	cytosol	19.91	32.58
CDY36610	Canola	cytosol	22.22	32.43
CDY67855	Canola	peroxisome	34.26	32.17
TraesCS3D01G442700.1	Wheat	cytosol	35.19	31.41
TraesCS1D01G303100.1	Wheat	extracellular, plasma membrane	30.09	31.1
CDY36612	Canola	cytosol	19.44	30.88
TraesCS3D01G442500.1	Wheat	cytosol	31.94	30.8
TraesCS3D01G334200.1	Wheat	cytosol	27.31	29.06
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	26.85	28.16
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	26.85	27.88
TraesCS5D01G147200.1	Wheat	cytosol	27.78	26.32
AT1G53890.3	Thale cress	cytosol	27.78	24.69
TraesCS5D01G147400.1	Wheat	plastid	29.63	24.33
TraesCS3D01G306600.1	Wheat	cytosol	23.61	23.29
TraesCS5D01G147500.1	Wheat	nucleus	25.93	22.4
TraesCS1D01G330600.1	Wheat	cytosol	24.07	22.03
TraesCS4D01G121500.1	Wheat	cytosol	24.07	21.31
GSMUA_Achr3P24000_001	Banana	nucleus	46.3	12.11

Protein Annotations

EnsemblPlants:TraesCS2D01G114400.1	EnsemblPlantsGene:TraesCS2D01G114400	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF51	PFAM:PF04525	PFscan:PS51257
SEG:seg	SUPFAM:SSF54518	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr2D:+:63569363..63570130

Molecular Weight (calculated)

23221.0 Da

IEP (calculated)

9.826

GRAVY (calculated)

-0.146

Length

216 amino acids

Sequence
(BLAST)

001: MARVHSSPSF SSSSSPAAAA AACAGERRGK VFTLWLKSLV LNGRGCTVYD SDGHIVYRVD NYGSKCSDNV CLMDLRGNIV VNIHKKKLAF GKWEGYKWTG
101: RKQEASAWFK VARPRGGIFH RSGGRPSSSP CEFESDAGRA MRYRIDDDGG ARAGKRACCR IVDAGTGLVV AEVKRKVTAG GVALGEDVLA LVVEPGVDDS
201: LIMGLVLVYG LMNRTM

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.