Factsheet for Bra027804.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49893	Canola	cytosol	98.95	98.95
CDY45367	Canola	cytosol	78.53	97.4
AT1G63410.2	Thale cress	cytosol	90.58	80.47
PGSC0003DMT400010898	Potato	cytosol	29.84	44.88
Solyc12g056310.1.1	Tomato	plastid	46.07	44.67
VIT_02s0025g03730.t01	Wine grape	cytosol	46.07	43.56
KRH27952	Soybean	cytosol	43.46	43.01
PGSC0003DMT400014913	Potato	plastid	46.6	42.79
VIT_02s0025g03740.t01	Wine grape	plastid	46.07	42.72
PGSC0003DMT400007876	Potato	plastid	43.98	41.79
KRH77515	Soybean	cytosol	42.41	41.75
VIT_02s0025g03750.t01	Wine grape	cytosol	45.55	41.43
Solyc08g007980.2.1	Tomato	plastid	45.03	41.35
PGSC0003DMT400012847	Potato	cytosol	28.27	40.91
Solyc08g080750.2.1	Tomato	plastid	42.93	40.59
KRH59852	Soybean	cytosol	41.36	40.31
PGSC0003DMT400032165	Potato	cytosol	36.13	39.88
Solyc08g080760.1.1	Tomato	mitochondrion	41.36	39.7
Solyc08g080770.2.1	Tomato	plastid	41.36	37.26
TraesCS2A01G113800.1	Wheat	plastid	40.31	36.84
PGSC0003DMT400032166	Potato	plastid	40.84	36.79
EER99890	Sorghum	plastid	38.74	36.45
HORVU2Hr1G019720.1	Barley	plastid	39.79	36.36
TraesCS2D01G114400.1	Wheat	plastid	40.31	35.65
Bra001544.1-P	Field mustard	cytosol	38.22	35.1
TraesCS2B01G132800.1	Wheat	plastid	39.27	35.05
Bra039697.1-P	Field mustard	cytosol, extracellular, peroxisome	36.65	34.83
Bra039698.1-P	Field mustard	cytosol	36.13	34.33
Bra039696.1-P	Field mustard	cytosol	35.6	33.83
Bra021544.1-P	Field mustard	cytosol	36.65	33.65
KRH41152	Soybean	cytosol	26.18	33.56
Os07t0672600-00	Rice	plastid	38.22	31.88
Bra005092.1-P	Field mustard	cytosol	28.8	28.21
Zm00001d029119_P001	Maize	mitochondrion	35.6	27.53
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	34.03	26.75
KXG39402	Sorghum	mitochondrion	36.13	26.74
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	34.03	26.0
HORVU6Hr1G081400.1	Barley	mitochondrion	34.03	25.69
Bra017111.1-P	Field mustard	cytosol	26.18	25.51
Bra000079.1-P	Field mustard	cytosol	26.18	25.51
TraesCS4D01G168500.1	Wheat	mitochondrion	34.03	25.19
Bra000080.1-P	Field mustard	cytosol	25.65	25.13
Bra001606.1-P	Field mustard	cytosol	27.75	24.88
Bra008497.1-P	Field mustard	cytosol	26.7	24.29
Bra027206.1-P	Field mustard	cytosol	27.75	24.2
Bra025487.1-P	Field mustard	cytosol	25.13	21.52
Bra025486.1-P	Field mustard	cytosol	25.13	21.52
Bra035195.1-P	Field mustard	cytosol	23.04	20.95
GSMUA_Achr3P24000_001	Banana	nucleus	38.74	8.96

Protein Annotations

EnsemblPlants:Bra027804.1	EnsemblPlants:Bra027804.1-P	EnsemblPlantsGene:Bra027804	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF25	PFAM:PF04525
SUPFAM:SSF54518	UniParc:UPI0002541A76	UniProt:M4EG90	MapMan:35.1	:	:

Description

AT1G63410 (E=8e-098) | unknown protein

Coordinates

chrA09:-:6036858..6037961

Molecular Weight (calculated)

22019.6 Da

IEP (calculated)

8.633

GRAVY (calculated)

-0.152

Length

191 amino acids

Sequence
(BLAST)

001: MARVFPQAGV SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKSSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYRECG TLSSTEEVKP
101: FVKIKRSCIR DGDWEVRDET NEVFWILRFD PKFSFQIIDV HGNIIAKVKP KQSSNGVILG EDVLSLEVKP RIDHSLVVTL VTVYGLIKGI V

Best Arabidopsis Sequence Match ( AT1G63410.1 )
(BLAST)

001: MARVFPQAAI SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKCSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYRECG SFTSTEEVKP
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGV V

Arabidopsis Description

Protein LURP-one-related 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH27]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.