CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77515	Soybean	cytosol	89.64	89.18
KRH59852	Soybean	cytosol	66.84	65.82
KRH41152	Soybean	cytosol	47.15	61.07
VIT_02s0025g03740.t01	Wine grape	plastid	48.7	45.63
VIT_02s0025g03730.t01	Wine grape	cytosol	47.67	45.54
PGSC0003DMT400032165	Potato	cytosol	40.41	45.09
PGSC0003DMT400012847	Potato	cytosol	30.57	44.7
Solyc08g080750.2.1	Tomato	plastid	46.63	44.55
PGSC0003DMT400007876	Potato	plastid	46.11	44.28
PGSC0003DMT400010898	Potato	cytosol	29.02	44.09
Bra027804.1-P	Field mustard	cytosol	43.01	43.46
VIT_02s0025g03750.t01	Wine grape	cytosol	47.15	43.33
CDY49893	Canola	cytosol	42.49	42.93
Solyc08g080770.2.1	Tomato	plastid	47.15	42.92
Solyc08g080760.1.1	Tomato	mitochondrion	44.04	42.71
Solyc12g056310.1.1	Tomato	plastid	43.52	42.64
PGSC0003DMT400032166	Potato	plastid	46.63	42.45
Solyc08g007980.2.1	Tomato	plastid	45.08	41.83
PGSC0003DMT400014913	Potato	plastid	45.08	41.83
CDY45367	Canola	cytosol	31.61	39.61
EER99890	Sorghum	plastid	41.45	39.41
AT1G63410.2	Thale cress	cytosol	43.52	39.07
KRH06275	Soybean	peroxisome	39.9	38.31
TraesCS2A01G113800.1	Wheat	plastid	41.45	38.28
HORVU2Hr1G019720.1	Barley	plastid	41.45	38.28
KRH47711	Soybean	peroxisome	38.86	38.07
TraesCS2B01G132800.1	Wheat	plastid	41.97	37.85
TraesCS2D01G114400.1	Wheat	plastid	41.45	37.04
Os07t0672600-00	Rice	plastid	43.01	36.24
Zm00001d029119_P001	Maize	mitochondrion	41.45	32.39
KXG39402	Sorghum	mitochondrion	43.01	32.17
TraesCS4A01G142700.1	Wheat	mitochondrion, plastid	38.34	30.45
HORVU6Hr1G081400.1	Barley	mitochondrion	38.86	29.64
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	38.34	29.6
TraesCS4D01G168500.1	Wheat	mitochondrion	38.86	29.07
KRH09578	Soybean	cytosol	29.53	27.4
KRH09722	Soybean	cytosol	26.42	23.29
KRH23583	Soybean	cytosol	26.42	23.18
KRH47444	Soybean	cytosol	25.91	22.83
KRH44464	Soybean	cytosol	25.39	22.37
KRH77592	Soybean	cytosol	25.91	22.03
KRH41249	Soybean	cytosol	25.39	21.88
KRH27882	Soybean	cytosol	25.91	21.37
KRH59981	Soybean	cytosol, mitochondrion	24.35	20.52
GSMUA_Achr3P24000_001	Banana	nucleus	42.49	9.93

Protein Annotations

EMBL:ACUP02006735	EnsemblPlants:KRH27952	EnsemblPlantsGene:GLYMA_11G025000	EntrezGene:100786480	Gene3D:3.20.90.20	InterPro:IPR025659
InterPro:IPR038595	InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF25
PFAM:PF04525	ProteinID:KRH27952	ProteinID:KRH27952.1	SUPFAM:SSF54518	UniParc:UPI000233CE3D	UniProt:I1LGG8
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:+:1767713..1768839

Molecular Weight (calculated)

21759.6 Da

IEP (calculated)

9.496

GRAVY (calculated)

-0.096

Length

193 amino acids

Sequence
(BLAST)

001: MTKVYPHDPT SSPCMSYGPE SYTLWMKSLV LHSNGCTVYD SNGVIVYRVD NYDTKGRRHV NLLDLRGTVL CTIHKKLLAF GRWNVYRGSD NSDFKIQEKP
101: WFQVKRCYKM ITRKVTCQIT VACKKYCIKK IAGKTTFQIV NIDGDIVAYA KQKHSSSGVV LGNDVLTLDV EGGIDHSLIM AFVTVFGLIC GKM

Best Arabidopsis Sequence Match ( AT1G63410.2 )
(BLAST)

001: MARVFPQAAI SSPYMSTERE TFTVWMKSLV YQTNGLTVYN SNGEITYRVE NYDKCSNEVH IMDLHGNILF TIRKKKLWLF GSWYVYRECG SFTSTEEVKP
101: CARIKRSSIR DGDWEVRDET NEVFWILRFD PKFAFQIIDI HGNIIAQVKP KQSSNGITLG EDVLTLEVKP RVDHSLVVTL VTVYGLIKGI DGEVKQLRDF
201: EEEEVAVGDE IAIEI

Arabidopsis Description

Protein LURP-one-related 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SH27]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.