CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80120.1	KRG89812	AT2G41090.1	17360592
AT1G80120.1	KRG94975	AT2G41090.1	17360592
AT1G80120.1	KRH18664	AT2G41090.1	17360592
AT1G80120.1	KRG89812	AT5G21274.1	17360592
AT1G80120.1	KRG94975	AT5G21274.1	17360592
AT1G80120.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23583	Soybean	cytosol	91.78	91.36
KRH47444	Soybean	cytosol	73.97	73.97
KRH44464	Soybean	cytosol	73.52	73.52
VIT_09s0002g06920.t01	Wine grape	cytosol	67.12	71.01
AT1G80120.1	Thale cress	cytosol	61.19	63.81
Bra008497.1-P	Field mustard	cytosol	60.27	62.86
CDY41119	Canola	cytosol	60.27	62.86
CDY37567	Canola	cytosol	60.27	62.86
GSMUA_Achr3P13680_001	Banana	cytosol	30.59	51.15
CDX87294	Canola	cytosol	59.82	50.97
Bra035195.1-P	Field mustard	cytosol	48.4	50.48
HORVU3Hr1G075150.1	Barley	cytosol	47.49	47.49
TraesCS3B01G340800.1	Wheat	cytosol	47.49	47.27
TraesCS3A01G296300.1	Wheat	cytosol	47.49	47.27
EES03690	Sorghum	cytosol	47.95	47.09
TraesCS3D01G306600.1	Wheat	cytosol	47.03	47.03
Zm00001d043318_P001	Maize	cytosol	47.49	46.64
Os01t0771000-01	Rice	cytosol	47.03	45.37
HORVU1Hr1G077760.1	Barley	cytosol	42.01	40.0
Zm00001d000310_P001	Maize	cytosol	44.29	39.75
Os05t0510100-01	Rice	cytosol	42.92	39.66
EES18481	Sorghum	cytosol	43.38	39.42
TraesCS1B01G341900.1	Wheat	cytosol	41.55	38.72
TraesCS1D01G330600.1	Wheat	cytosol	41.55	38.56
TraesCS1A01G328100.1	Wheat	cytosol	42.01	37.86
KRH09578	Soybean	cytosol	31.05	32.69
KRH41249	Soybean	cytosol	31.51	30.8
KRH27882	Soybean	cytosol	32.88	30.77
KRH77592	Soybean	cytosol	31.51	30.4
KRH59981	Soybean	cytosol, mitochondrion	30.59	29.26
KRH47711	Soybean	peroxisome	25.11	27.92
KRH59852	Soybean	cytosol	24.2	27.04
KRH27952	Soybean	cytosol	23.29	26.42
KRH06275	Soybean	peroxisome	24.2	26.37
KRH77515	Soybean	cytosol	22.37	25.26
KRH41152	Soybean	cytosol	15.98	23.49

Protein Annotations

EMBL:ACUP02009107	EMBL:BT092299	EnsemblPlants:KRH09722	EnsemblPlantsGene:GLYMA_15G007500	EntrezGene:100527456	Gene3D:3.20.90.20
InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087
PANTHER:PTHR31087:SF2	PFAM:PF04525	ProteinID:KRH09722	ProteinID:KRH09722.1	SEG:seg	SUPFAM:SSF54518
UniParc:UPI0001B158F1	UniProt:C6T4D8	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:626771..628081

Molecular Weight (calculated)

24764.4 Da

IEP (calculated)

4.724

GRAVY (calculated)

-0.333

Length

219 amino acids

Sequence
(BLAST)

001: MTLCMAAENM SEVEEEHGYV FKEEIHLTVF KTSLFFAGDG FTVYDCKGQL VFRVDSYGPD TRDRDELVLM DPNGRCLLTV RRKRPSLHQR WEGFKGERMD
101: GDKPIFSVRR ASIIGRSRAS LTVEMYDNPG EEYQIDGCFS QRCCTVFNVT KESVAEIRRK VDPTTSVVLG KEVFSLCVKP GFDAAFAMGF VLVLDQINGE
201: DYVDDRATTE PAVHPATED

Best Arabidopsis Sequence Match ( AT3G15810.1 )
(BLAST)

001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED

Arabidopsis Description

Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.