Factsheet for Bra008497.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P
Bra002368.1-P
Bra006595.1-P
Bra018296.1-P
Bra033467.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80120.1	Bra000214.1-P	AT2G41090.1	17360592
AT1G80120.1	Bra018296.1-P	AT3G51920.1	17360592
AT1G80120.1	Bra033467.1-P	AT3G51920.1	17360592
AT1G80120.1	Bra002368.1-P	AT5G21274.1	17360592
AT1G80120.1	Bra006595.1-P	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY41119	Canola	cytosol	99.52	99.52
CDY37567	Canola	cytosol	99.52	99.52
AT1G80120.1	Thale cress	cytosol	92.38	92.38
Bra035195.1-P	Field mustard	cytosol	73.81	73.81
VIT_09s0002g06920.t01	Wine grape	cytosol	65.71	66.67
KRH47444	Soybean	cytosol	65.71	63.01
Bra001606.1-P	Field mustard	cytosol	63.33	62.44
KRH44464	Soybean	cytosol	63.81	61.19
KRH23583	Soybean	cytosol	63.81	60.91
Bra027206.1-P	Field mustard	cytosol	63.33	60.73
KRH09722	Soybean	cytosol	62.86	60.27
GSMUA_Achr3P13680_001	Banana	cytosol	32.86	52.67
TraesCS3B01G340800.1	Wheat	cytosol	48.57	46.36
TraesCS3D01G306600.1	Wheat	cytosol	48.1	46.12
HORVU3Hr1G075150.1	Barley	cytosol	48.1	46.12
TraesCS3A01G296300.1	Wheat	cytosol	47.62	45.45
Os01t0771000-01	Rice	cytosol	47.62	44.05
EES03690	Sorghum	cytosol	46.19	43.5
Zm00001d043318_P001	Maize	cytosol	45.71	43.05
HORVU1Hr1G077760.1	Barley	cytosol	44.29	40.43
Bra017111.1-P	Field mustard	cytosol	37.62	40.31
Bra005092.1-P	Field mustard	cytosol	37.14	40.0
Os05t0510100-01	Rice	cytosol	44.76	39.66
TraesCS1B01G341900.1	Wheat	cytosol	43.81	39.15
TraesCS1D01G330600.1	Wheat	cytosol	43.81	38.98
Zm00001d000310_P001	Maize	cytosol	45.24	38.93
EES18481	Sorghum	cytosol	44.29	38.59
Bra000080.1-P	Field mustard	cytosol	35.71	38.46
Bra000079.1-P	Field mustard	cytosol	35.71	38.27
TraesCS1A01G328100.1	Wheat	cytosol	43.81	37.86
Bra025487.1-P	Field mustard	cytosol	32.38	30.49
Bra025486.1-P	Field mustard	cytosol	32.38	30.49
Bra021544.1-P	Field mustard	cytosol	29.05	29.33
Bra001544.1-P	Field mustard	cytosol	26.67	26.92
Bra027804.1-P	Field mustard	cytosol	24.29	26.7
Bra039696.1-P	Field mustard	cytosol	24.29	25.37
Bra039697.1-P	Field mustard	cytosol, extracellular, peroxisome	23.33	24.38
Bra039698.1-P	Field mustard	cytosol	22.86	23.88

Protein Annotations

EnsemblPlants:Bra008497.1	EnsemblPlants:Bra008497.1-P	EnsemblPlantsGene:Bra008497	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF2	PFAM:PF04525
SEG:seg	SUPFAM:SSF54518	UniParc:UPI0002546E23	UniProt:M4CWA0	MapMan:35.1	:

Description

AT1G80120 (E=4e-101) | unknown protein

Coordinates

chrA02:-:15971332..15972141

Molecular Weight (calculated)

23463.9 Da

IEP (calculated)

5.414

GRAVY (calculated)

-0.301

Length

210 amino acids

Sequence
(BLAST)

001: MKGGLLVDDE FIHGEETNLT VRKTSLFFSG DGFTVYDCKG SLVFRVDSYG GPNNRDTDEV VLMDAHGRCL LTLRRKRPSL RRRWEGYLGE RTDGQKPIFG
101: VRRSSIIGRN SVTVEVYAEY ECSEYLIEGN FGQRSCTVVE AETRRKVAEI RRKVDASTNV MLGKDVFSLN VKAGFDGAFA MGLVLVLDQI YGDDYVGVGE
201: EQVHPSAVDL

Best Arabidopsis Sequence Match ( AT1G80120.1 )
(BLAST)

001: MKGGLLVDDE FIHGEERSLT VRKTSLFFAG DGFTVYDCKG SLVFRVDSYG GPNTRDTDEV VLMDAHGRCL LTLRRKRPSL RRRWEGYLGE RSDGQKPIFG
101: VRRSSIIGRN SVTVEVYGDY QCSEYLIEGS FGARNCTVVE AETRRKVAEI RRKVDASTNV MLGKDVFSLN VKPGFDGAFA MGLVLVLDQI YGDDLLEVGE
201: EQVHPSAEDL

Arabidopsis Description

Protein LURP-one-related 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSC7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.