Factsheet for HORVU1Hr1G077760.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001280.1
HORVU2Hr1G016740.4
HORVU3Hr1G038010.1
HORVU3Hr1G079210.4
HORVU4Hr1G026290.3
HORVU5Hr1G014060.1
HORVU5Hr1G014070.2
HORVU5Hr1G044710.4

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80120.1	HORVU0Hr1G001280.1	AT2G41090.1	17360592
AT1G80120.1	HORVU2Hr1G016740.4	AT2G41090.1	17360592
AT1G80120.1	HORVU3Hr1G038010.1	AT2G41090.1	17360592
AT1G80120.1	HORVU3Hr1G079210.4	AT2G41090.1	17360592
AT1G80120.1	HORVU4Hr1G026290.3	AT2G41090.1	17360592
AT1G80120.1	HORVU5Hr1G014060.1	AT2G41090.1	17360592
AT1G80120.1	HORVU5Hr1G014070.2	AT2G41090.1	17360592
AT1G80120.1	HORVU5Hr1G044710.4	AT2G41090.1	17360592
AT1G80120.1	HORVU0Hr1G001280.1	AT5G21274.1	17360592
AT1G80120.1	HORVU2Hr1G016740.4	AT5G21274.1	17360592
AT1G80120.1	HORVU3Hr1G038010.1	AT5G21274.1	17360592
AT1G80120.1	HORVU3Hr1G079210.4	AT5G21274.1	17360592
AT1G80120.1	HORVU4Hr1G026290.3	AT5G21274.1	17360592
AT1G80120.1	HORVU5Hr1G014060.1	AT5G21274.1	17360592
AT1G80120.1	HORVU5Hr1G014070.2	AT5G21274.1	17360592
AT1G80120.1	HORVU5Hr1G044710.4	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G341900.1	Wheat	cytosol	89.13	87.23
TraesCS1D01G330600.1	Wheat	cytosol	88.7	86.44
TraesCS1A01G328100.1	Wheat	cytosol	88.7	83.95
Os05t0510100-01	Rice	cytosol	78.26	75.95
EES18481	Sorghum	cytosol	78.26	74.69
Zm00001d000310_P001	Maize	cytosol	78.26	73.77
HORVU3Hr1G075150.1	Barley	cytosol	62.61	65.75
GSMUA_Achr3P13680_001	Banana	cytosol	30.87	54.2
VIT_09s0002g06920.t01	Wine grape	cytosol	42.17	46.86
PGSC0003DMT400001705	Potato	cytosol	42.61	46.45
Solyc03g116710.2.1	Tomato	cytosol	41.74	45.5
AT1G80120.1	Thale cress	cytosol	40.87	44.76
Bra008497.1-P	Field mustard	cytosol	40.43	44.29
CDY37567	Canola	cytosol	40.43	44.29
CDY41119	Canola	cytosol	40.43	44.29
CDY58464	Canola	cytosol	40.87	44.13
CDY30113	Canola	cytosol	41.74	43.84
Bra001606.1-P	Field mustard	cytosol	40.43	43.66
Bra027206.1-P	Field mustard	cytosol	41.3	43.38
CDX75845	Canola	cytosol	40.0	43.19
KRH44464	Soybean	cytosol	40.87	42.92
KRH47444	Soybean	cytosol	40.43	42.47
AT3G15810.1	Thale cress	cytosol	40.43	42.27
KRH09722	Soybean	cytosol	40.0	42.01
KRH23583	Soybean	cytosol	39.57	41.36
Bra035195.1-P	Field mustard	cytosol	33.04	36.19
CDX87294	Canola	cytosol	40.43	36.19
HORVU4Hr1G024080.1	Barley	cytosol	30.43	28.69
HORVU1Hr1G069180.1	Barley	cytosol, extracellular, plasma membrane	25.65	28.37
HORVU5Hr1G046200.1	Barley	cytosol	27.83	27.47
HORVU3Hr1G097260.1	Barley	cytosol	23.04	27.46
HORVU4Hr1G047270.1	Barley	cytosol, extracellular, peroxisome	24.35	27.45
HORVU3Hr1G097390.1	Barley	plastid	23.04	26.24
HORVU3Hr1G097270.1	Barley	plastid	21.74	25.91
HORVU3Hr1G097460.1	Barley	mitochondrion, plastid	23.04	25.0
HORVU2Hr1G019720.1	Barley	plastid	22.61	24.88
HORVU3Hr1G080430.1	Barley	plastid	24.78	24.36
HORVU3Hr1G097470.1	Barley	plastid	23.04	24.31
HORVU3Hr1G097400.6	Barley	cytosol, mitochondrion, plastid	21.74	23.15
HORVU3Hr1G097510.1	Barley	plastid	11.74	22.88
HORVU5Hr1G046140.1	Barley	mitochondrion	23.91	22.63
HORVU3Hr1G080440.1	Barley	plastid	24.35	19.58
HORVU5Hr1G046160.1	Barley	mitochondrion	28.26	17.11
HORVU6Hr1G081400.1	Barley	mitochondrion	17.83	16.21
HORVU4Hr1G089220.1	Barley	plasma membrane	17.83	15.65

Protein Annotations

EnsemblPlants:HORVU1Hr1G077760.1	EnsemblPlantsGene:HORVU1Hr1G077760	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF8	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	UniParc:UPI000295BD18	UniProt:M0XSN0	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr1H:+:518522096..518523550

Molecular Weight (calculated)

24080.6 Da

IEP (calculated)

4.738

GRAVY (calculated)

0.012

Length

230 amino acids

Sequence
(BLAST)

001: MKGSGGEAAA AAAVVGEEHC EEEDRELTVR KTTLFSPGDG LEAYDHRTGD LAFRVETYGR GGACGGGAAA GDLALLGAAG DPVLTVRRRR PSLHHRWDGF
101: LGDGVAAGAK PLFSARRSSI LGTGSGILVD LLAPGTAKEL RVDGSFPRRC CRVVVAEEEG EEETVVAEVR RKVDEGAHVL LGRDVFVLWV RAGFDAAFAM
201: GIVLVLGRIT GDEVDGVLGE ELLLEATSPV

Best Arabidopsis Sequence Match ( AT3G15810.1 )
(BLAST)

001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED

Arabidopsis Description

Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.