Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G145200.1 | Wheat | cytosol | 94.85 | 96.09 |
| TraesCS5D01G147200.1 | Wheat | cytosol | 91.85 | 93.86 |
| TraesCS5B01G144000.1 | Wheat | cytosol | 90.99 | 92.98 |
| HORVU4Hr1G024080.1 | Barley | cytosol | 66.09 | 63.11 |
| EES16590 | Sorghum | cytosol | 60.09 | 62.22 |
| Os11t0120300-01 | Rice | cytosol | 58.37 | 61.54 |
| EES15617 | Sorghum | cytosol | 60.52 | 61.3 |
| Zm00001d052371_P001 | Maize | cytosol | 57.51 | 60.91 |
| Os12t0120100-01 | Rice | cytosol | 57.94 | 60.81 |
| Zm00001d044671_P001 | Maize | cytosol | 55.79 | 59.63 |
| EES09153 | Sorghum | cytosol | 59.23 | 59.23 |
| EES16588 | Sorghum | cytosol, nucleus, plastid | 58.37 | 56.67 |
| Zm00001d044474_P001 | Maize | cytosol | 57.51 | 55.83 |
| GSMUA_Achr11P... | Banana | cytosol | 46.78 | 55.05 |
| HORVU4Hr1G047270.1 | Barley | cytosol, extracellular, peroxisome | 47.21 | 53.92 |
| GSMUA_Achr7P21880_001 | Banana | cytosol | 46.35 | 53.47 |
| GSMUA_Achr4P02410_001 | Banana | cytosol, peroxisome, plastid | 47.64 | 53.37 |
| HORVU1Hr1G069180.1 | Barley | cytosol, extracellular, plasma membrane | 46.78 | 52.4 |
| GSMUA_Achr10P... | Banana | plastid | 45.92 | 51.2 |
| EES09152 | Sorghum | plastid | 53.65 | 50.0 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 41.63 | 48.5 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 44.21 | 47.69 |
| HORVU3Hr1G080430.1 | Barley | plastid | 47.21 | 47.01 |
| GSMUA_Achr11P... | Banana | cytosol | 46.35 | 45.96 |
| AT2G38640.1 | Thale cress | cytosol | 36.48 | 43.37 |
| Bra017111.1-P | Field mustard | cytosol | 35.62 | 42.35 |
| CDY18377 | Canola | cytosol | 35.62 | 42.35 |
| CDX93313 | Canola | cytosol | 35.62 | 42.35 |
| CDY62435 | Canola | cytosol | 35.19 | 42.05 |
| CDY07714 | Canola | cytosol | 35.19 | 42.05 |
| CDY62436 | Canola | cytosol | 35.19 | 41.84 |
| CDY07715 | Canola | cytosol | 35.19 | 41.84 |
| Bra000080.1-P | Field mustard | cytosol | 34.76 | 41.54 |
| Bra000079.1-P | Field mustard | cytosol | 34.76 | 41.33 |
| Zm00001d052372_P002 | Maize | plastid | 55.79 | 41.27 |
| CDX91482 | Canola | cytosol | 34.33 | 41.03 |
| Bra005092.1-P | Field mustard | cytosol | 33.91 | 40.51 |
| KRH09578 | Soybean | cytosol | 36.05 | 40.38 |
| HORVU3Hr1G080440.1 | Barley | plastid | 48.07 | 39.16 |
| CDY60759 | Canola | cytosol | 32.62 | 38.97 |
| HORVU3Hr1G097510.1 | Barley | plastid | 16.74 | 33.05 |
| HORVU3Hr1G097260.1 | Barley | cytosol | 26.18 | 31.61 |
| HORVU3Hr1G097390.1 | Barley | plastid | 26.18 | 30.2 |
| HORVU3Hr1G075150.1 | Barley | cytosol | 28.33 | 30.14 |
| HORVU3Hr1G097270.1 | Barley | plastid | 24.46 | 29.53 |
| HORVU3Hr1G097460.1 | Barley | mitochondrion, plastid | 26.61 | 29.25 |
| HORVU3Hr1G097470.1 | Barley | plastid | 26.18 | 27.98 |
| HORVU1Hr1G077760.1 | Barley | cytosol | 27.47 | 27.83 |
| HORVU2Hr1G019720.1 | Barley | plastid | 24.46 | 27.27 |
| HORVU3Hr1G097400.6 | Barley | cytosol, mitochondrion, plastid | 24.89 | 26.85 |
| HORVU5Hr1G046140.1 | Barley | mitochondrion | 27.47 | 26.34 |
| HORVU6Hr1G081400.1 | Barley | mitochondrion | 26.61 | 24.51 |
| HORVU4Hr1G089220.1 | Barley | plasma membrane | 26.61 | 23.66 |
| HORVU5Hr1G046160.1 | Barley | mitochondrion | 30.9 | 18.95 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G046200.1 | EnsemblPlantsGene:HORVU5Hr1G046200 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF5 | PFAM:PF04525 | SEG:seg |
| SUPFAM:SSF54518 | UniParc:UPI000294CE7B | UniProt:M0Z560 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr5H:-:358842119..358843436
Molecular Weight (calculated)
24847.8 Da
IEP (calculated)
10.777
GRAVY (calculated)
-0.079
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKVHPNVAA PEVPAGGRAA VVEVQQPTVL TVWRKSLLFN CDGFTVFDSA GGLAFRVDRY GSSSGSRRRA EDVVLMDAAG KPLLTVRRKI KLSLGLGEHW
101: VVYEGDATAS ATAARPLLSV RRHHAGLRRR ASDKTLAHVT LLGPYSAGAD AAGYVVEGSY GRRSCAVRER DARGGAPVAE VRRKESVGDD VFRLVVPDHR
201: LGTALSMGVV VALDQMFGAA SSRTSLLPRS WSA
101: VVYEGDATAS ATAARPLLSV RRHHAGLRRR ASDKTLAHVT LLGPYSAGAD AAGYVVEGSY GRRSCAVRER DARGGAPVAE VRRKESVGDD VFRLVVPDHR
201: LGTALSMGVV VALDQMFGAA SSRTSLLPRS WSA
001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
Arabidopsis Description
Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.