Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G123400.1 | Wheat | cytosol | 92.62 | 92.62 |
| TraesCS4D01G121500.1 | Wheat | cytosol | 91.39 | 91.39 |
| TraesCS4A01G192000.1 | Wheat | cytosol | 90.98 | 90.98 |
| HORVU5Hr1G046200.1 | Barley | cytosol | 63.11 | 66.09 |
| Os11t0120300-01 | Rice | cytosol | 56.56 | 62.44 |
| EES16590 | Sorghum | cytosol | 57.38 | 62.22 |
| Os12t0120100-01 | Rice | cytosol | 56.15 | 61.71 |
| EES15617 | Sorghum | cytosol | 56.97 | 60.43 |
| Zm00001d044671_P001 | Maize | cytosol | 53.69 | 60.09 |
| Zm00001d052371_P001 | Maize | cytosol | 54.1 | 60.0 |
| EES09153 | Sorghum | cytosol | 56.56 | 59.23 |
| EES16588 | Sorghum | cytosol, nucleus, plastid | 55.33 | 56.25 |
| Zm00001d044474_P001 | Maize | cytosol | 52.87 | 53.75 |
| GSMUA_Achr11P... | Banana | cytosol | 43.44 | 53.54 |
| EES09152 | Sorghum | plastid | 53.28 | 52.0 |
| GSMUA_Achr4P02410_001 | Banana | cytosol, peroxisome, plastid | 44.26 | 51.92 |
| HORVU1Hr1G069180.1 | Barley | cytosol, extracellular, plasma membrane | 43.44 | 50.96 |
| GSMUA_Achr7P21880_001 | Banana | cytosol | 41.39 | 50.0 |
| HORVU4Hr1G047270.1 | Barley | cytosol, extracellular, peroxisome | 40.98 | 49.02 |
| GSMUA_Achr10P... | Banana | plastid | 41.39 | 48.33 |
| VIT_08s0032g00760.t01 | Wine grape | cytosol | 38.93 | 47.5 |
| VIT_08s0056g00180.t01 | Wine grape | cytosol | 41.39 | 46.76 |
| GSMUA_Achr11P... | Banana | cytosol | 43.44 | 45.11 |
| HORVU3Hr1G080430.1 | Barley | plastid | 40.98 | 42.73 |
| KRH09578 | Soybean | cytosol | 34.84 | 40.87 |
| Zm00001d052372_P002 | Maize | plastid | 51.64 | 40.0 |
| AT2G38640.1 | Thale cress | cytosol | 31.97 | 39.8 |
| CDY07714 | Canola | cytosol | 31.15 | 38.97 |
| CDY62435 | Canola | cytosol | 31.15 | 38.97 |
| CDY62436 | Canola | cytosol | 31.15 | 38.78 |
| Bra000079.1-P | Field mustard | cytosol | 31.15 | 38.78 |
| CDY07715 | Canola | cytosol | 31.15 | 38.78 |
| Bra000080.1-P | Field mustard | cytosol | 30.74 | 38.46 |
| CDX91482 | Canola | cytosol | 30.74 | 38.46 |
| Bra017111.1-P | Field mustard | cytosol | 30.74 | 38.27 |
| CDY18377 | Canola | cytosol | 30.74 | 38.27 |
| CDX93313 | Canola | cytosol | 30.74 | 38.27 |
| Bra005092.1-P | Field mustard | cytosol | 30.33 | 37.95 |
| CDY60759 | Canola | cytosol | 29.1 | 36.41 |
| HORVU3Hr1G080440.1 | Barley | plastid | 41.39 | 35.31 |
| HORVU3Hr1G097510.1 | Barley | plastid | 15.57 | 32.2 |
| HORVU3Hr1G075150.1 | Barley | cytosol | 28.69 | 31.96 |
| HORVU1Hr1G077760.1 | Barley | cytosol | 28.69 | 30.43 |
| HORVU3Hr1G097270.1 | Barley | plastid | 22.95 | 29.02 |
| HORVU3Hr1G097260.1 | Barley | cytosol | 22.54 | 28.5 |
| HORVU3Hr1G097390.1 | Barley | plastid | 22.13 | 26.73 |
| HORVU3Hr1G097470.1 | Barley | plastid | 23.77 | 26.61 |
| HORVU3Hr1G097460.1 | Barley | mitochondrion, plastid | 22.95 | 26.42 |
| HORVU5Hr1G046140.1 | Barley | mitochondrion | 25.82 | 25.93 |
| HORVU4Hr1G089220.1 | Barley | plasma membrane | 26.23 | 24.43 |
| HORVU2Hr1G019720.1 | Barley | plastid | 20.9 | 24.4 |
| HORVU3Hr1G097400.6 | Barley | cytosol, mitochondrion, plastid | 20.9 | 23.61 |
| HORVU6Hr1G081400.1 | Barley | mitochondrion | 23.77 | 22.92 |
| HORVU5Hr1G046160.1 | Barley | mitochondrion | 26.64 | 17.11 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G024080.1 | EnsemblPlantsGene:HORVU4Hr1G024080 | Gene3D:3.20.90.20 | InterPro:IPR025659 | InterPro:IPR038595 | InterPro:LOR |
| InterPro:LOR_sf | InterPro:Tubby-like_C | PANTHER:PTHR31087 | PANTHER:PTHR31087:SF5 | PFAM:PF04525 | SEG:seg |
| SUPFAM:SSF54518 | UniParc:UPI000294C6AB | UniProt:M0V1Y0 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr4H:+:136145330..136146618
Molecular Weight (calculated)
26174.6 Da
IEP (calculated)
9.294
GRAVY (calculated)
-0.070
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKVHPDAAV PLPEAPAAGH SRPVGAGAEQ EEPPPEAVAL TVWRKSLLFN CDGFTVFDAA GGLVFRVDCY GTSGCRRRHA EDVVLMGATG IPLLTVRRRR
101: LSLAEHWVIY DGDGGEVDAP KPLLSVRRCH AGLLRHAHAS TASKQKALAH VTPLTPALRE SYVVEGSYAR RCVAVRDARG EAVAEVRRKE SPVGNEVFRL
201: VVPYPRRLGT PLAMGIVIAL DEMFGNSGAG ASAARSLLPR SWSM
101: LSLAEHWVIY DGDGGEVDAP KPLLSVRRCH AGLLRHAHAS TASKQKALAH VTPLTPALRE SYVVEGSYAR RCVAVRDARG EAVAEVRRKE SPVGNEVFRL
201: VVPYPRRLGT PLAMGIVIAL DEMFGNSGAG ASAARSLLPR SWSM
001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS
Arabidopsis Description
Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.