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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • nucleus 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G144800.1 Wheat nucleus 94.65 96.23
TraesCS5B01G143600.1 Wheat mitochondrion 95.88 93.95
TraesCS5D01G147500.1 Wheat nucleus 95.06 92.4
Os11t0121000-00 Rice plastid 64.2 68.12
Os12t0120500-01 Rice plastid 63.79 67.98
EES09156 Sorghum plastid 61.32 58.66
Zm00001d005038_P001 Maize plastid 59.26 56.47
GSMUA_Achr7P21840_001 Banana cytosol 41.56 49.03
GSMUA_Achr11P... Banana cytosol 40.33 47.8
VIT_08s0056g00130.t01 Wine grape cytosol 46.5 47.48
GSMUA_Achr4P02400_001 Banana cytosol 38.68 39.17
PGSC0003DMT400030793 Potato cytosol 33.33 38.03
HORVU5Hr1G046160.1 Barley mitochondrion 57.61 36.84
Solyc09g005210.2.1 Tomato nucleus 37.04 34.35
HORVU3Hr1G097270.1 Barley plastid 24.28 30.57
HORVU3Hr1G097510.1 Barley plastid 14.81 30.51
HORVU4Hr1G047270.1 Barley cytosol, extracellular, peroxisome 25.51 30.39
HORVU1Hr1G069180.1 Barley cytosol, extracellular, plasma membrane 25.93 30.29
HORVU3Hr1G097390.1 Barley plastid 25.1 30.2
HORVU3Hr1G097260.1 Barley cytosol 23.87 30.05
HORVU5Hr1G046200.1 Barley cytosol 26.34 27.47
HORVU3Hr1G075150.1 Barley cytosol 24.69 27.4
HORVU3Hr1G097460.1 Barley mitochondrion, plastid 23.87 27.36
HORVU3Hr1G097400.6 Barley cytosol, mitochondrion, plastid 24.28 27.31
HORVU3Hr1G097470.1 Barley plastid 23.87 26.61
HORVU3Hr1G080430.1 Barley plastid 25.51 26.5
HORVU4Hr1G024080.1 Barley cytosol 25.93 25.82
HORVU2Hr1G019720.1 Barley plastid 21.81 25.36
HORVU1Hr1G077760.1 Barley cytosol 22.63 23.91
HORVU3Hr1G080440.1 Barley plastid 24.69 20.98
HORVU6Hr1G081400.1 Barley mitochondrion 21.81 20.95
HORVU4Hr1G089220.1 Barley plasma membrane 15.64 14.5
Protein Annotations
EnsemblPlants:HORVU5Hr1G046140.1EnsemblPlantsGene:HORVU5Hr1G046140Gene3D:3.20.90.20InterPro:IPR025659InterPro:IPR038595InterPro:LOR
InterPro:LOR_sfInterPro:Tubby-like_CPANTHER:PTHR31087PANTHER:PTHR31087:SF26PFAM:PF04525PFscan:PS51257
SEG:segSUPFAM:SSF54518UniParc:UPI000294BD7AUniProt:M0UJN0MapMan:35.1:
Description
No Description!
Coordinates
chrchr5H:+:358544555..358546363
Molecular Weight (calculated)
26760.0 Da
IEP (calculated)
9.167
GRAVY (calculated)
-0.329
Length
243 amino acids
Sequence
(BLAST)
001: MSRIHPNAEA SRRLLRDGAP AAGAATAACY TVWMRSSMGF QGTDGFSVYG AGGELAFRVD NYSRRRKIFA GELTLMDGHG APLLSLRPQI ISMHDQWNCY
101: KAPEEGQAKR ARSPQLFSVR KCSVLQNNRE AEVYMSSACT TTNDASASDH GTTGHQAPGF WIEGCFRRRN CKIRRAHDGK EVARIARKKA RTAATPDTAP
201: LTLGEDVFSL LVQPDADCTM IMALVVVLDR ICWRPYTPLI CSS
Best Arabidopsis Sequence Match ( AT5G41590.1 )
(BLAST)
001: MFPFLKQRSR SVHGEDAPSS TESTVSVAAA DIGGACTTLT VWRKSLLVSC EGFTVIDSNG DLIYRVDNYA RTRPEELILM DKDGNSLLLM HRTKKITLVD
101: SWGIYEANDT KGETKIPKCP TWYMRKNLKM NILSTKSDIL AYVYSGSFDK KNSYIIKGSY RCKSCKIVHV PLNKTVVEIK RKEVRTKGVR FGSDVFDLVV
201: NPGFDTGLAM ALVLLLDQMF S
Arabidopsis Description
Protein LURP-one-related 17 [Source:UniProtKB/Swiss-Prot;Acc:A0MFL4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.