Factsheet for GSMUA_Achr11P10530_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P21840_001	Banana	cytosol	78.54	78.16
GSMUA_Achr4P02400_001	Banana	cytosol	69.76	59.58
VIT_08s0056g00130.t01	Wine grape	cytosol	53.66	46.22
Os12t0120500-01	Rice	plastid	51.22	46.05
Os11t0121000-00	Rice	plastid	50.73	45.41
EES09156	Sorghum	plastid	52.2	42.13
TraesCS5A01G144800.1	Wheat	nucleus	48.78	41.84
TraesCS5D01G147400.1	Wheat	plastid	53.17	41.44
TraesCS5B01G143700.1	Wheat	plastid	53.17	41.29
TraesCS5D01G147500.1	Wheat	nucleus	49.27	40.4
Zm00001d005038_P001	Maize	plastid	50.24	40.39
HORVU5Hr1G046140.1	Barley	mitochondrion	47.8	40.33
TraesCS5B01G143600.1	Wheat	mitochondrion	48.78	40.32
Zm00001d052373_P001	Maize	plastid	51.71	40.3
Zm00001d023305_P001	Maize	plastid	49.76	38.49
EES09154	Sorghum	plastid	52.68	37.76
Zm00001d044670_P001	Maize	nucleus	49.27	36.2
PGSC0003DMT400030793	Potato	cytosol	35.12	33.8
GSMUA_Achr3P13680_001	Banana	cytosol	21.46	33.59
Solyc09g005210.2.1	Tomato	nucleus	41.46	32.44
EES15616	Sorghum	plastid	49.27	32.37
TraesCS5A01G145000.1	Wheat	nucleus, plastid	53.66	30.81
GSMUA_Achr7P21880_001	Banana	cytosol	30.24	30.69
GSMUA_Achr11P...	Banana	cytosol	29.27	30.3
GSMUA_Achr4P02410_001	Banana	cytosol, peroxisome, plastid	29.76	29.33
GSMUA_Achr6P32380_001	Banana	cytosol	27.8	29.08
HORVU5Hr1G046160.1	Barley	mitochondrion	53.66	28.95
GSMUA_Achr6P15880_001	Banana	plastid	27.8	28.08
GSMUA_Achr10P...	Banana	plastid	28.29	27.75
GSMUA_Achr11P...	Banana	cytosol	31.71	27.66
GSMUA_Achr5P07550_001	Banana	cytosol	28.29	27.23
GSMUA_Achr3P09620_001	Banana	nucleus	26.34	25.35
GSMUA_Achr9P16860_001	Banana	cytosol	26.34	18.43
GSMUA_Achr3P24000_001	Banana	nucleus	28.78	7.14

Protein Annotations

EnsemblPlants:GSMUA_Achr11P10530_001	EnsemblPlants:GSMUA_Achr11T10530_001	EnsemblPlantsGene:GSMUA_Achr11G10530_001	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595
InterPro:LOR	InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF26	PFAM:PF04525
SUPFAM:SSF54518	UniParc:UPI0002964582	UniProt:M0RR33	MapMan:35.1	:	:

Description

Putative Protein LURP-one-related 12 [Source:GMGC_GENE;Acc:GSMUA_Achr11G10530_001]

Coordinates

chr11:-:8330721..8333399

Molecular Weight (calculated)

23542.3 Da

IEP (calculated)

7.893

GRAVY (calculated)

-0.434

Length

205 amino acids

Sequence
(BLAST)

001: MSRVHPSLRK IDDEELATVT NYPSVWTVWK KSSMAFHGTD GFSIYDNKGR LAFRVDNYSR KHKCFEGELL LMDGNGKAVM ALRPQILSMH DRWSGFKGED
101: DLRTSYKTHV FSMRRRSILQ SCEEAEVFMD TPDDQSPVPS FRTEGCFKRR NCKILDSKGE EVAQISPKKV NKSVTLSDDV FNLIIQPAMD TELVMAFLVI
201: MDRIC

Best Arabidopsis Sequence Match ( AT3G15810.1 )
(BLAST)

001: MELVEETIPK EGKKMGERIV VDKAYLYQED KPLTVCKTSL FYTGDGFAAY DCRGDIIFRV DSYGPDTRDN DEIVLMDATG KCLLTVKRKR PTLHQRWEGF
101: LGERSEGQKP IFSVRRSSII GRCTMEVEVY DGTGEEYIID GDFSQRSCLI YDTKKCTVAE IKRKVDASTN VMLGRDVFTL EIKPGFDGAF AMGLVVVLDQ
201: INGDDPVEIG DEQVHPFVED

Arabidopsis Description

Protein LURP-one-related 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVZ8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.