Factsheet for TraesCS5B01G143600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G144800.1	Wheat	nucleus	94.76	98.33
TraesCS5D01G147500.1	Wheat	nucleus	97.98	97.2
HORVU5Hr1G046140.1	Barley	mitochondrion	93.95	95.88
Os11t0121000-00	Rice	plastid	64.11	69.43
Os12t0120500-01	Rice	plastid	63.71	69.3
EES09156	Sorghum	plastid	61.29	59.84
Zm00001d005038_P001	Maize	plastid	58.87	57.25
TraesCS5B01G143700.1	Wheat	plastid	57.66	54.17
GSMUA_Achr7P21840_001	Banana	cytosol	41.13	49.51
GSMUA_Achr11P...	Banana	cytosol	40.32	48.78
VIT_08s0056g00130.t01	Wine grape	cytosol	45.97	47.9
GSMUA_Achr4P02400_001	Banana	cytosol	38.71	40.0
PGSC0003DMT400030793	Potato	cytosol	33.47	38.97
Solyc09g005210.2.1	Tomato	nucleus	36.69	34.73
TraesCS3B01G486900.1	Wheat	cytosol, plastid	25.0	31.63
TraesCS3B01G372300.1	Wheat	cytosol, peroxisome, plastid	25.81	31.53
TraesCS3B01G486300.1	Wheat	plastid	24.6	31.12
TraesCS1B01G314000.1	Wheat	extracellular, plasma membrane	25.81	30.77
TraesCS3B01G372600.1	Wheat	cytosol, extracellular, peroxisome	25.4	30.73
TraesCS3B01G486200.1	Wheat	plastid	23.79	29.65
TraesCS3B01G372400.1	Wheat	plastid	24.19	29.13
TraesCS3B01G486600.1	Wheat	cytosol	22.98	28.93
TraesCS3B01G487200.1	Wheat	cytosol	22.58	28.57
TraesCS3B01G340800.1	Wheat	cytosol	25.0	28.18
TraesCS5B01G144000.1	Wheat	cytosol	25.81	28.07
TraesCS3B01G487000.1	Wheat	plastid	22.18	28.06
TraesCS3B01G487100.1	Wheat	plastid	23.39	27.75
TraesCS3B01G486800.1	Wheat	plastid	25.0	27.43
TraesCS4B01G123400.1	Wheat	cytosol	26.61	27.05
TraesCS4B01G396800.1	Wheat	plastid	22.98	26.89
TraesCS2B01G132800.1	Wheat	plastid	22.98	26.64
TraesCS1B01G341900.1	Wheat	cytosol	22.98	24.26
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	20.16	20.0

Protein Annotations

EnsemblPlants:TraesCS5B01G143600.1	EnsemblPlantsGene:TraesCS5B01G143600	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF26	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:271110074..271111594

Molecular Weight (calculated)

27311.5 Da

IEP (calculated)

9.168

GRAVY (calculated)

-0.349

Length

248 amino acids

Sequence
(BLAST)

001: MSRIHPNAEA SRRLLRHGAG AGAAASAACY TVWMRSSMGF QGTDGFSVYD AGGELAFRVD NYSRRRKIFA GELTLMDGHG APLLSLRPQI ISMHDQWNCY
101: KAPEEGQAKR ARSQQLFSVR KCSVLQNNRE AEVYMSSACT TTTTTTTTDA SASDHGTTGH QSPGFWIEGC FRRRNCKIRR AHDGKEVARI ARKKARTAAT
201: PDTAPLTLGE DVFSLVVQPD ADCTMIMALV VVLDRICWRP YTPLICSS

Best Arabidopsis Sequence Match ( AT5G41590.1 )
(BLAST)

001: MFPFLKQRSR SVHGEDAPSS TESTVSVAAA DIGGACTTLT VWRKSLLVSC EGFTVIDSNG DLIYRVDNYA RTRPEELILM DKDGNSLLLM HRTKKITLVD
101: SWGIYEANDT KGETKIPKCP TWYMRKNLKM NILSTKSDIL AYVYSGSFDK KNSYIIKGSY RCKSCKIVHV PLNKTVVEIK RKEVRTKGVR FGSDVFDLVV
201: NPGFDTGLAM ALVLLLDQMF S

Arabidopsis Description

Protein LURP-one-related 17 [Source:UniProtKB/Swiss-Prot;Acc:A0MFL4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.