Factsheet for TraesCS5B01G143700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G147400.1	Wheat	plastid	95.83	96.2
TraesCS5A01G145000.1	Wheat	nucleus, plastid	93.56	69.19
HORVU5Hr1G046160.1	Barley	mitochondrion	93.56	65.0
Zm00001d023305_P001	Maize	plastid	59.85	59.62
TraesCS5B01G143600.1	Wheat	mitochondrion	54.17	57.66
Zm00001d044670_P001	Maize	nucleus	59.09	55.91
GSMUA_Achr11P...	Banana	cytosol	41.29	53.17
EES15616	Sorghum	plastid	61.36	51.92
GSMUA_Achr7P21840_001	Banana	cytosol	40.15	51.46
VIT_08s0056g00130.t01	Wine grape	cytosol	39.77	44.12
GSMUA_Achr4P02400_001	Banana	cytosol	37.5	41.25
PGSC0003DMT400030793	Potato	cytosol	32.95	40.85
Solyc09g005210.2.1	Tomato	nucleus	37.88	38.17
TraesCS3B01G486300.1	Wheat	plastid	23.48	31.63
TraesCS3B01G372300.1	Wheat	cytosol, peroxisome, plastid	24.24	31.53
TraesCS3B01G340800.1	Wheat	cytosol	25.76	30.91
TraesCS3B01G372600.1	Wheat	cytosol, extracellular, peroxisome	23.86	30.73
TraesCS5B01G144000.1	Wheat	cytosol	26.52	30.7
TraesCS3B01G372400.1	Wheat	plastid	23.86	30.58
TraesCS1B01G314000.1	Wheat	extracellular, plasma membrane	23.86	30.29
TraesCS3B01G486200.1	Wheat	plastid	22.73	30.15
TraesCS3B01G487200.1	Wheat	cytosol	22.35	30.1
TraesCS3B01G487000.1	Wheat	plastid	21.97	29.59
TraesCS3B01G486800.1	Wheat	plastid	25.0	29.2
TraesCS3B01G486900.1	Wheat	cytosol, plastid	21.21	28.57
TraesCS2B01G132800.1	Wheat	plastid	22.73	28.04
TraesCS4B01G396800.1	Wheat	plastid	21.97	27.36
TraesCS3B01G487100.1	Wheat	plastid	21.59	27.27
TraesCS1B01G341900.1	Wheat	cytosol	23.48	26.38
TraesCS4B01G123400.1	Wheat	cytosol	24.24	26.23
TraesCS3B01G486600.1	Wheat	cytosol	19.32	25.89
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	20.45	21.6

Protein Annotations

EnsemblPlants:TraesCS5B01G143700.1	EnsemblPlantsGene:TraesCS5B01G143700	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF26	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:271140861..271141744

Molecular Weight (calculated)

28292.8 Da

IEP (calculated)

9.763

GRAVY (calculated)

-0.310

Length

264 amino acids

Sequence
(BLAST)

001: MCLLLSGSTS GPTSMSRIHP SDRGDGARRA ARTAAERQQQ LPAVYTVWKR SSMGFQGTDG FSVYDAAGRL AFRVDNYARR PKAFAGELLL MDGRGAPLLS
101: LRPQIFSLHD RWNCYRVAPG EESCPDTDRS SSAQQLFSML KCAALQSTDD AEVHMSSAST ATTSGRGCRA PPSPPPGYRV EGCFSRRSCK ITRSDGQEAA
201: RILRKKAGGP TASAAAPPRP VALGDDVFSL VVRPGVDAAT VMAIVVVMDR ICRKPYAPMA CSSQ

Best Arabidopsis Sequence Match ( AT2G38640.1 )
(BLAST)

001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS

Arabidopsis Description

Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.