Factsheet for TraesCS3B01G487000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G443000.1	Wheat	plastid	92.86	92.39
TraesCS3A01G450100.1	Wheat	cytosol	90.31	90.31
TraesCS3B01G486200.1	Wheat	plastid	84.69	83.42
TraesCS3B01G487200.1	Wheat	cytosol	82.14	82.14
TraesCS3B01G486900.1	Wheat	cytosol, plastid	77.55	77.55
HORVU3Hr1G097470.1	Barley	plastid	86.22	77.52
TraesCS3B01G486800.1	Wheat	plastid	89.29	77.43
TraesCS3B01G487100.1	Wheat	plastid	81.12	76.08
TraesCS3B01G486300.1	Wheat	plastid	76.02	76.02
TraesCS3B01G486600.1	Wheat	cytosol	74.49	74.11
EES04157	Sorghum	plastid	61.22	59.7
Zm00001d011926_P001	Maize	cytosol	59.69	57.92
Os01t0931600-00	Rice	cytosol	61.73	56.02
Zm00001d011925_P001	Maize	cytosol	57.65	55.39
Zm00001d042239_P001	Maize	plastid	61.22	54.79
EES04155	Sorghum	cytosol	59.69	53.67
EES04156	Sorghum	plastid	57.65	52.56
TraesCS2B01G132800.1	Wheat	plastid	41.33	37.85
TraesCS4B01G155500.1	Wheat	cytosol, mitochondrion	39.8	31.2
TraesCS3B01G372600.1	Wheat	cytosol, extracellular, peroxisome	28.57	27.32
TraesCS3B01G372400.1	Wheat	plastid	28.57	27.18
TraesCS3B01G372300.1	Wheat	cytosol, peroxisome, plastid	28.06	27.09
TraesCS5B01G144000.1	Wheat	cytosol	30.1	25.88
TraesCS1B01G314000.1	Wheat	extracellular, plasma membrane	26.02	24.52
TraesCS4B01G123400.1	Wheat	cytosol	30.1	24.18
TraesCS4B01G396800.1	Wheat	plastid	25.51	23.58
TraesCS3B01G340800.1	Wheat	cytosol	26.02	23.18
TraesCS5B01G143600.1	Wheat	mitochondrion	28.06	22.18
TraesCS5B01G143700.1	Wheat	plastid	29.59	21.97
TraesCS1B01G341900.1	Wheat	cytosol	24.49	20.43

Protein Annotations

EnsemblPlants:TraesCS3B01G487000.1	EnsemblPlantsGene:TraesCS3B01G487000	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF12	PFAM:PF04525	SEG:seg
SUPFAM:SSF54518	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3B:+:733270897..733271487

Molecular Weight (calculated)

21010.4 Da

IEP (calculated)

9.575

GRAVY (calculated)

-0.096

Length

196 amino acids

Sequence
(BLAST)

001: MAKIQPLSSS PCSTSSSGVQ QGRHAYTVWM KSLVFNGNGC AVYGPDGAVA FRVDNYGCRG GREVLFMDRA GNALIRIRRK GFGMFRRWEV SRCAQDGGQD
101: KEATPWFSVR RAEKGGAAVV MHGGAGTCYT MDGCSRKPEY RIRDVDGTVV AEVARKQTAA GVVLGEDVLT LTVGTEVGHL LVLGLVVVRG LMNGSM

Best Arabidopsis Sequence Match ( AT3G14260.1 )
(BLAST)

001: MQIYRRPFET KTWQYRICPA ETMVKIHPDL TTSGAGEETS SPYLTTEQES FTIWMKSLVF NTNGCTVFDS KGNIIYRVDN YNSKSCREVY LMDLSGHVLF
101: TLRRQKFGLF KTWEGYRSSS ATVESTTKLE YFRVKNNVFQ VPNKDSSSSY RVNAGSCRND EQYCYKMVTR GSSLAIEDNC GKLLAEVKRK QSINGLKLGD
201: DVLTMMVESQ VDHSFIIGLV LAHSLINCIL

Arabidopsis Description

Protein LURP-one-related 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.