CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra005092.1-P	Field mustard	cytosol	97.95	97.95
CDY60759	Canola	cytosol	96.41	96.41
CDY18377	Canola	cytosol	87.69	87.24
AT2G38640.1	Thale cress	cytosol	87.18	86.73
CDX93313	Canola	cytosol	86.67	86.22
CDY62435	Canola	cytosol	86.15	86.15
CDY07715	Canola	cytosol	86.15	85.71
CDY07714	Canola	cytosol	85.64	85.64
CDY62436	Canola	cytosol	85.64	85.2
VIT_08s0032g00760.t01	Wine grape	cytosol	56.92	55.5
VIT_08s0056g00180.t01	Wine grape	cytosol	56.92	51.39
GSMUA_Achr6P32380_001	Banana	cytosol	51.28	51.02
KRH09578	Soybean	cytosol	50.77	47.6
GSMUA_Achr11P...	Banana	cytosol	47.69	46.97
GSMUA_Achr3P09620_001	Banana	nucleus	50.26	46.01
GSMUA_Achr5P07550_001	Banana	cytosol	49.74	45.54
GSMUA_Achr7P21880_001	Banana	cytosol	46.67	45.05
GSMUA_Achr6P15880_001	Banana	plastid	46.15	44.34
GSMUA_Achr4P02410_001	Banana	cytosol, peroxisome, plastid	46.67	43.75
GSMUA_Achr10P...	Banana	plastid	46.67	43.54
TraesCSU01G031000.1	Wheat	cytosol	46.15	42.86
TraesCS5A01G557700.1	Wheat	cytosol	44.62	42.23
GSMUA_Achr11P...	Banana	cytosol	50.77	42.13
TraesCS4B01G396800.1	Wheat	plastid	45.64	41.98
Os05t0311500-01	Rice	cytosol	44.62	40.47
TraesCS1A01G303600.1	Wheat	extracellular, plasma membrane	42.56	40.29
HORVU1Hr1G069180.1	Barley	cytosol, extracellular, plasma membrane	42.56	39.9
TraesCS1B01G314000.1	Wheat	extracellular, plasma membrane	42.56	39.9
TraesCS1D01G303100.1	Wheat	extracellular, plasma membrane	42.56	39.71
TraesCS3D01G334400.1	Wheat	cytosol, extracellular, peroxisome	40.51	38.35
TraesCS3A01G340700.1	Wheat	cytosol, extracellular, peroxisome	39.49	38.12
Os01t0817650-00	Rice	cytosol, extracellular, plastid	41.54	38.03
TraesCS3B01G372400.1	Wheat	plastid	40.0	37.86
TraesCS3A01G340800.1	Wheat	cytosol, extracellular, peroxisome	40.0	37.86
EES01655	Sorghum	cytosol	40.51	37.8
CDY41119	Canola	cytosol	40.51	37.62
CDY37567	Canola	cytosol	40.51	37.62
TraesCS3D01G334300.1	Wheat	cytosol, extracellular, peroxisome	40.0	37.5
TraesCS3B01G372600.1	Wheat	cytosol, extracellular, peroxisome	38.97	37.07
TraesCS3D01G334200.1	Wheat	cytosol	38.46	36.95
TraesCS3B01G372300.1	Wheat	cytosol, peroxisome, plastid	38.46	36.95
EES09153	Sorghum	cytosol	44.1	36.91
EES16590	Sorghum	cytosol	42.56	36.89
EES19708	Sorghum	plastid	42.05	36.61
TraesCS5B01G144000.1	Wheat	cytosol	42.56	36.4
Zm00001d052371_P001	Maize	cytosol	41.03	36.36
Os05t0484800-01	Rice	plastid	43.59	36.32
Zm00001d038514_P001	Maize	plastid	42.05	36.28
HORVU4Hr1G047270.1	Barley	cytosol, extracellular, peroxisome	37.95	36.27
Zm00001d044671_P001	Maize	cytosol	40.51	36.24
Os11t0120300-01	Rice	cytosol	40.51	35.75
EES15617	Sorghum	cytosol	42.05	35.65
Os12t0120100-01	Rice	cytosol	40.51	35.59
Zm00001d010627_P001	Maize	cytosol, plastid	41.03	35.4
Zm00001d043087_P001	Maize	cytosol, extracellular, plastid	38.46	35.38
TraesCS5D01G147200.1	Wheat	cytosol	41.03	35.09
Zm00001d012520_P001	Maize	cytosol	36.92	34.95
TraesCS5A01G145200.1	Wheat	cytosol	40.51	34.35
HORVU5Hr1G046200.1	Barley	cytosol	41.03	34.33
EES16588	Sorghum	cytosol, nucleus, plastid	41.54	33.75
Zm00001d044474_P001	Maize	cytosol	41.03	33.33
GSMUA_Achr9P16860_001	Banana	cytosol	49.74	33.11
HORVU3Hr1G080430.1	Barley	plastid	37.95	31.62
CDY30113	Canola	cytosol	35.38	31.51
CDX75845	Canola	cytosol	34.36	31.46
CDY58464	Canola	cytosol	33.85	30.99
HORVU4Hr1G024080.1	Barley	cytosol	38.46	30.74
CDX87294	Canola	cytosol	39.49	29.96
TraesCS4B01G123400.1	Wheat	cytosol	37.44	29.92
TraesCS4D01G121500.1	Wheat	cytosol	37.44	29.92
TraesCS4A01G192000.1	Wheat	cytosol	36.92	29.51
CDY45367	Canola	cytosol	23.08	29.22
EES09152	Sorghum	plastid	36.41	28.4
TraesCS3A01G340900.1	Wheat	mitochondrion	39.49	27.8
CDY49893	Canola	cytosol	27.18	27.75
CDY71164	Canola	cytosol, extracellular, peroxisome	26.15	26.56
CDY24068	Canola	peroxisome	27.18	26.37
HORVU3Hr1G080440.1	Barley	plastid	38.46	26.22
CDY24067	Canola	cytosol	26.67	25.87
Zm00001d052372_P002	Maize	plastid	40.51	25.08
CDX75761	Canola	cytosol	29.23	24.78
CDY67855	Canola	peroxisome	29.23	24.78
CDY33238	Canola	cytosol, peroxisome, plastid	28.72	24.35
CDX82489	Canola	cytosol	28.21	23.91
CDY24069	Canola	cytosol	20.51	22.86
CDY36610	Canola	cytosol	16.92	22.3
HORVU4Hr1G089220.1	Barley	plasma membrane	29.23	21.76
CDY36612	Canola	cytosol	14.36	20.59

Protein Annotations

EnsemblPlants:CDX91482	EnsemblPlantsGene:GSBRNA2T00152838001	Gene3D:3.20.90.20	InterPro:IPR025659	InterPro:IPR038595	InterPro:LOR
InterPro:LOR_sf	InterPro:Tubby-like_C	PANTHER:PTHR31087	PANTHER:PTHR31087:SF22	PFAM:PF04525	ProteinID:CDX91482
ProteinID:CDX91482.1	SEG:seg	SUPFAM:SSF54518	UniParc:UPI0004EB75F5	MapMan:35.1	:

Description

BnaC04g06680D

Coordinates

chrLK031867:-:1368434..1369430

Molecular Weight (calculated)

22348.3 Da

IEP (calculated)

9.175

GRAVY (calculated)

-0.296

Length

195 amino acids

Sequence
(BLAST)

001: MTKVHPKFQN TCEESLCDSK EAVVLTVWKK SLLFNCDGFT VYNSNGELVF RVDNYMNCPK DNIVLMDASG LPLLSIRRKK LSLGDWWMVY DGETQRDPIF
101: TAKKNVSIMT NKKSLVSVSS KKTVLYEIEG SYSQRSCKIL DERRNKKKTA EIKRKEAMVG GVSFGKDVFK LIVEPEMEPC VAMALTIILD QMYRY

Best Arabidopsis Sequence Match ( AT2G38640.1 )
(BLAST)

001: MTKVHPKFPS TCEESLCDSK AAVVLTVWKK SLLFNCDGFT VYNANGELVF RVDNYMNCPR DNIVLMDASG FPLLSIRRKK LSLGDCWMVY DGETERDPIF
101: TARKNVSIIS NRKSLAWVSA KKTVLYEIEG SYGQRSCKIL DERRNKKKTA EIKRKETVIG GVAFGKDVYK LIVESEMEPR VAMALTIILD QMFRSS

Arabidopsis Description

Protein LURP-one-related 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZVI6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.